A word cloud of NCV publication titles 2021 through 2025 (January 1, 2021-December 31, 2025).
Recent Publications by NCV members
2025
1: Guo X, Li H, Zhu B, Wang X, Xu Q, Aquino E, Koo M, Li Q, Cai J, Glaser S, Wu
C. HFD feeding for seven months abolishes STING disruption-driven but not female
sex-based protection against hepatic steatosis and inflammation in mice. J Nutr
Biochem. 2025 Jan;135:109770. doi: 10.1016/j.jnutbio.2024.109770. Epub 2024 Sep
14. PMID: 39284534; PMCID: PMC11620956.
2: Krishnamurthy R, Krishnamoorthy C, Dietsch AM, Natarajan SK. Molecular
biomarkers of dysphagia targeted exercise induced neuroplasticity: A review of
mechanistic processes and preliminary data on detraining effects. Brain Res.
2025 Jan 1;1846:149287. doi: 10.1016/j.brainres.2024.149287. Epub 2024 Oct 20.
PMID: 39437875.
3: Kaur Sardarni U, Ambikan AT, Acharya A, Johnson SD, Avedissian SN, Végvári Á,
Neogi U, Byrareddy SN. SARS-CoV-2 variants mediated tissue-specific metabolic
reprogramming determines the disease pathophysiology in a hamster model. Brain
Behav Immun. 2025 Jan;123:914-927. doi: 10.1016/j.bbi.2024.10.032. Epub 2024 Oct
29. PMID: 39481495; PMCID: PMC12165279.
4: Chaudhari J, Lai DC, Vu HLX. African swine fever viral proteins that inhibit
cGAS-STING pathway and type-I interferon production. Virology. 2025
Jan;602:110317. doi: 10.1016/j.virol.2024.110317. Epub 2024 Nov 26. PMID:
39616703.
5: Lievens EJP, Agarkova IV, Dunigan DD, Van Etten JL, Becks L. High life
history diversity within a single genus of algal viruses. ISME J. 2025 Jan
2;19(1):wraf146. doi: 10.1093/ismejo/wraf146. PMID: 40626923; PMCID:
PMC12319314.
6: Wang LL, Seravalli J, Eaton B, Liu Y, Holbrook MR, Lan WJ, Xiang SH.
Identification of Filovirus Entry Inhibitors from Marine Fungus-Derived Indole
Alkaloids. Mar Drugs. 2025 Jan 3;23(1):23. doi: 10.3390/md23010023. PMID:
39852525; PMCID: PMC11766795.
7: Hodges AL, Walker LR, Everding T, Mote BE, Vu HLX, Ciobanu DC. Metagenomic
detection and genome assembly of novel PRRSV-2 strain using Oxford Nanopore
Flongle flow cell. J Anim Sci. 2025 Jan 4;103:skae395. doi: 10.1093/jas/skae395.
PMID: 39742418; PMCID: PMC11826234.
8: Lakamp AD, Neujahr AC, Hille MM, Loy JD, Fernando SC, Spangler ML. Genetic
influence on the composition of the ocular microbiome in preweaned beef calves.
J Anim Sci. 2025 Jan 4;103:skaf153. doi: 10.1093/jas/skaf153. PMID: 40319373;
PMCID: PMC12124251.
9: Lakamp AD, Neujahr AC, Fernando SC, Snelling WM, Spangler ML. Short
communication: imputation accuracy of host genomic data from metagenomic
sequence information. J Anim Sci. 2025 Jan 4;103:skaf175. doi:
10.1093/jas/skaf175. PMID: 40380820; PMCID: PMC12202137.
10: Patel M, Panja S, Zaman LA, Yeapuri P, Bhattarai S, Gorantla S, Chang L,
Heredia A, Walczak P, Hanson B, Cohen SM, Kevadiya BD, Gendelman HE. CCR5-ligand
decorated rilpivirine lipid-based nanoparticles for sustained antiretroviral
responses. Nat Commun. 2025 Jan 8;16(1):513. doi: 10.1038/s41467-024-55544-9.
PMID: 39779664; PMCID: PMC11711180.
11: Xu X, Niu M, Lamberty BG, Emanuel K, Apostol MJF, Fox HS. Transformation of
brain myeloid cell populations by SIV in rhesus macaques revealed by multiomics.
Commun Biol. 2025 Jan 21;8(1):100. doi: 10.1038/s42003-024-07443-4. PMID:
39838075; PMCID: PMC11751027.
12: Wang LL, Karim SU, Hand A, Brunkhorst R, Petersen M, Altman S, Liu Y, Zhang
L, Bai F, Xiang SH. Identification of Benzothiophene-Derived Inhibitors of
Flaviviruses by Targeting RNA-Dependent RNA Polymerase. Viruses. 2025 Jan
23;17(2):145. doi: 10.3390/v17020145. PMID: 40006900; PMCID: PMC11861172.
13: Moore TC, Pinkerton TS, Petro TM. IRF3 Promotes Production of IL-6 and
Nitric Oxide but Represses CCL22 in RAW264.7 Macrophage Cells Exposed to
Lipopolysaccharides in Culture. J Inflamm Res. 2025 Jan 27;18:1255-1265. doi:
10.2147/JIR.S496930. PMID: 39897523; PMCID: PMC11784258.
14: Acharya A, Kumar N, Singh K, Byrareddy SN. "Mpox in MSM: Tackling stigma,
minimizing risk factors, exploring pathogenesis, and treatment approaches".
Biomed J. 2025 Feb;48(1):100746. doi: 10.1016/j.bj.2024.100746. Epub 2024 May 9.
PMID: 38734408; PMCID: PMC11751411.
15: Tatineni S, Mondal S, Wegulo SN, Hein GL. Triticum mosaic virus: An overview
of biology, functional genomics, gene expression vector, and management
strategies. Virology. 2025 Feb;603:110377. doi: 10.1016/j.virol.2024.110377.
Epub 2024 Dec 24. PMID: 39729964.
16: Hubing V, Marquis A, Ziemann C, Moriyama H, Moriyama EN, Zhang L.
Cytoplasmic Shift of Interferon Regulatory Factors Co-Evolved With Jawed
Vertebrate Innate Immunity. J Med Virol. 2025 Feb;97(2):e70247. doi:
10.1002/jmv.70247. PMID: 39977406; PMCID: PMC11841930.
17: Johnson SD, Pino M, Acharya A, Clain JA, Bose D, Nguyen K, Harper J,
Villinger F, Paiardini M, Byrareddy SN. IL-21 and anti-α4β7 dual therapy during
ART promotes immunological and microbiome responses in SIV-infected macaques.
JCI Insight. 2025 Feb 4;10(6):e184491. doi: 10.1172/jci.insight.184491. PMID:
39903521; PMCID: PMC11949015.
18: Dornbach CW, Wells JE, Berry ED, Fernando SC, Broadway PR, Hales KE.
Assessment of Antimicrobial Exposure on Generic <i>Escherichia coli</i> and
<i>Enterococcus</i> spp. Concentration, Prevalence, and Resistance to
Antimicrobials in Beef Cattle Raised with or Without Antimicrobials. Foodborne
Pathog Dis. 2025 Feb 7. doi: 10.1089/fpd.2024.0145. Epub ahead of print. PMID:
39918877.
19: Yang J, Agrawal K, Stanley J 3rd, Li R, Jacobs N, Wang H, Lu C, Qu R, Clarke
D, Chen Y, Jiang Y, Bai D, Zheng S, Fox H, Ho YC, Huttner A, Gerstein M, Kluger
Y, Zhang L, Spudich S. Multi-omic Characterization of HIV Effects at Single Cell
Level across Human Brain Regions. bioRxiv [Preprint]. 2025 Feb
8:2025.02.05.636707. doi: 10.1101/2025.02.05.636707. PMID: 39975288; PMCID:
PMC11839123.
20: Pekarek MJ, Madapong A, Wiggins J, Weaver EA. Adenoviral-Vectored
Multivalent Vaccine Provides Durable Protection Against Influenza B Viruses from
Victoria-like and Yamagata-like Lineages. Int J Mol Sci. 2025 Feb 12;26(4):1538.
doi: 10.3390/ijms26041538. PMID: 40004004; PMCID: PMC11855595.
21: Wang LL, Alfson K, Eaton B, Mattix ME, Goez-Gazi Y, Holbrook MR, Carrion R
Jr, Xiang SH. Algal Lectin Griffithsin Inhibits Ebola Virus Infection.
Molecules. 2025 Feb 14;30(4):892. doi: 10.3390/molecules30040892. PMID:
40005201; PMCID: PMC11858388.
22: Pandey K, Lewis DSM, Heo K, Acharya A, Fields T, Gowda K, Dean G, Rayalam S,
Byrareddy SN, Mody V, Taval S. 9-aminominocycline potentiates the efficacy of
EIDD-1931 and PF-332 by targeting the papain like protease enzyme of SARS-CoV-2.
Sci Rep. 2025 Feb 15;15(1):5671. doi: 10.1038/s41598-025-89717-3. PMID:
39955340; PMCID: PMC11830066.
23: Edagwa B, Nayan MU, Sillman B, Das S, Hanson B, Sultana A, Le NTH, Deodhar
S, Dash A, Cohen S, Gendelman H. An Ultra-Long-Acting Dimeric Bictegravir
Prodrug Defined by a Short Pharmacokinetic Tail. Res Sq [Preprint]. 2025 Feb
19:rs.3.rs-5959131. doi: 10.21203/rs.3.rs-5959131/v1. PMID: 40034436; PMCID:
PMC11875291.
24: Mone K, Garcia EJT, Abdullatif F, Rasquinha MT, Sur M, Hanafy M, Zinniel DK,
Singh S, Thomas R, Barletta RG, Gebregiworgis T, Reddy J. Metabolic
Reprogramming in Response to Freund's Adjuvants: Insights from Serum
Metabolomics. Microorganisms. 2025 Feb 22;13(3):492. doi:
10.3390/microorganisms13030492. PMID: 40142385; PMCID: PMC11944801.
25: Henriques LR, Botelho BBF, Carlson RM, Carvalho JVRP, Oliveira EG, Agarkova
IV, Van Etten JL, Dunigan DD, Rodrigues RAL. Revealing the hidden diversity of
Chlorella heliozoae-infecting giant viruses. Npj Viruses. 2025 Feb 22;3(1):12.
doi: 10.1038/s44298-025-00088-y. PMID: 40295838; PMCID: PMC11847008.
26: Degarege A, Erko B, Brett-Major DM, Levecke B, Animut A, Negash Y,
Broadhurst MJ, Michaud T, Bilder CR. Performance of Urine Reagent Test Strips in
Detecting <i>Schistosoma haematobium</i> Infection in Individual and Pooled
Urine Samples. Microorganisms. 2025 Feb 26;13(3):510. doi:
10.3390/microorganisms13030510. PMID: 40142403; PMCID: PMC11944887.
27: Gaikwad M, George A, Sivadas A, Karunakaran K, N S, Byrareddy SN,
Mukhopadhyay C, Mudgal PP, Kulkarni M. Correction: Development and
characterization of formulations based on combinatorial potential of antivirals
against genital herpes. Naunyn Schmiedebergs Arch Pharmacol. 2025
Mar;398(3):3179. doi: 10.1007/s00210-024-03668-6. Erratum for: Naunyn
Schmiedebergs Arch Pharmacol. 2025 Mar;398(3):3103-3117. doi:
10.1007/s00210-024-03468-y. PMID: 39636407; PMCID: PMC11920288.
28: Daniel Estrella L, Trease AJ, Sheldon L, Roland NJ, Fox HS, Stauch KL. Tau
association with synaptic mitochondria coincides with energetic dysfunction and
excitatory synapse loss in the P301S tauopathy mouse model. Neurobiol Aging.
2025 Mar;147:163-175. doi: 10.1016/j.neurobiolaging.2024.12.006. Epub 2024 Dec
20. PMID: 39778459.
29: Petro TM, Esmael A, Pattee GL, Al-Sarmi F, Chiodo F, Agarkova IV, Dunigan
DD, Van Etten JL. Expression of human superoxide dismutase (SOD) 1 G93A and
chlorovirus ATCV-1 SOD increases the response of macrophages to inflammatory
stimulants, including ATCV-1 major capsid protein glycans. Immunobiology. 2025
Mar;230(2):152881. doi: 10.1016/j.imbio.2025.152881. Epub 2025 Feb 12. PMID:
39965330.
30: Bhattarai S, Kadry R, Yeapuri P, Lu Y, Foster EG, Zhang C, Dash P,
Poluektova LY, Gorantla S, Mosley RL, Gendelman HE. HIV-1 infection facilitates
Alzheimer's disease pathology in humanized APP knock-in immunodeficient mice.
NeuroImmune Pharm Ther. 2025 Feb 10;4(1):27-38. doi: 10.1515/nipt-2024-0018.
PMID: 40309515; PMCID: PMC12041850.
31: Rao VR, Rodriguez M, Byrareddy SN, Ranga U, Prasad VR. Neurovirulent and
non-neurovirulent strains of HIV-1 and their Tat proteins induce differential
cytokine-chemokine profiles. NeuroImmune Pharm Ther. 2025 Feb 10;4(1):39-47.
doi: 10.1515/nipt-2024-0020. PMID: 40313367; PMCID: PMC12041847.
32: Krishnamurthy R, Schultz DH, Wang Y, Natarajan SK, Barlow SM, Dietsch AM.
Multimodal Adaptations to Expiratory Musculature-Targeted Resistance Training: A
Preliminary Study in Healthy Young Adults. J Speech Lang Hear Res. 2025 Mar
5;68(3):987-1005. doi: 10.1044/2024_JSLHR-24-00294. Epub 2025 Feb 5. PMID:
39908358.
33: Matt SM, Nolan R, Manikandan S, Agarwal Y, Channer B, Oteju O, Daniali M,
Canagarajah JA, LuPone T, Mompho K, Runner K, Nickoloff-Bybel E, Li B, Niu M,
Schlachetzki JCM, Fox HS, Gaskill PJ. Dopamine-driven increase in IL-1β in
myeloid cells is mediated by differential dopamine receptor expression and
exacerbated by HIV. J Neuroinflammation. 2025 Mar 23;22(1):91. doi:
10.1186/s12974-025-03403-9. PMID: 40122818; PMCID: PMC11931822.
34: Pekarek MJ, Petro-Turnquist EM, Jeanjaquet NE, Hoagstrom KV, LaMontia-Hankin
E, Jahnke L, Madapong A, Weaver EA. Synthetic Neuraminidase Vaccine Induces
Cross-Species and Multi-Subtype Protection. Vaccines (Basel). 2025 Mar
28;13(4):364. doi: 10.3390/vaccines13040364. PMID: 40333263; PMCID: PMC12031341.
35: Durazo-Martínez K, Osorio FA, Delhon G, Hernández J, Vu HLX. New insights
into the testicular tropism of porcine reproductive and respiratory syndrome
virus. Microbiol Spectr. 2025 Apr;13(4):e0296424. doi:
10.1128/spectrum.02964-24. Epub 2025 Feb 19. PMID: 39969185; PMCID: PMC11960452.
36: Shi X, Zhang J, Zhao H, Li H, Zhu J, Xiong H. Differential tissue and
cellular distribution of chemokine C-C motif ligand 2 in grey/white matters of
healthy and simian immunodeficiency virus infected monkey. Brain Res Bull. 2025
Apr;223:111291. doi: 10.1016/j.brainresbull.2025.111291. Epub 2025 Mar 5. PMID:
40054539.
37: Yeapuri P, Machhi J, Foster EG, Kadry R, Bhattarai S, Lu Y, Sil S, Sapkota
R, Srivastava S, Kumar M, Ikezu T, Poluektova LY, Gendelman HE, Mosley RL.
Amyloid precursor protein and presenilin-1 knock-in immunodeficient mice exhibit
intraneuronal Aβ pathology, microgliosis, and extensive neuronal loss.
Alzheimers Dement. 2025 Apr;21(4):e70084. doi: 10.1002/alz.70084. Erratum in:
Alzheimers Dement. 2025 Jul;21(7):e70534. doi: 10.1002/alz.70534. PMID:
40195277; PMCID: PMC11975631.
38: Hahka T, Sekar D, Sahoo PK, Ravi A, Freel C, Krishnamoorthy C, Ramamurthy S,
Rapoza R, Drakowski R, Akbar A, VanOrmer M, Thoene M, Hanson CK, Nordgren T,
Natarajan SK, Anderson Berry A. RvD2 mitigates TNFɑ-Induced mitochondrial
reactive oxygen species through NRF2 signaling in placental trophoblasts. Front
Physiol. 2025 Apr 2;16:1547940. doi: 10.3389/fphys.2025.1547940. PMID: 40241717;
PMCID: PMC12000658.
39: Schnaubelt AT, Brett-Major DM, Williamson J, Barcal B, Carstens J, Peer A,
Wiley M, Broadhurst MJ. SARS-CoV-2 genomic surveillance using self-collected
saliva specimens during occupational testing programs. Front Public Health. 2025
Apr 8;13:1360862. doi: 10.3389/fpubh.2025.1360862. PMID: 40265067; PMCID:
PMC12011812.
40: Andrews AM, Chang L, Booze R, Roy S, Gorantla S, Sariyer IK, Fields J,
Eugenin E, Gendelman HE. The 29th Scientific Conference of the Society on
NeuroImmune Pharmacology in Omaha, NE, June 8-12, 2025. NeuroImmune Pharm Ther.
2025 Apr 10;4(1):131-192. doi: 10.1515/nipt-2025-0004. PMID: 40313365; PMCID:
PMC12041845.
41: Faris S, Xia K, Wagner AG, Xu Z, Smith N, Giner JL, Callahan B, Xie J, Wang
C. Conserved C143 forms a branched intermediate in Hedgehog autoprocessing: A
cancer drug discovery target against Hedgehog signaling. Proc Natl Acad Sci U S
A. 2025 Apr 29;122(17):e2415144122. doi: 10.1073/pnas.2415144122. Epub 2025 Apr
24. PMID: 40273103; PMCID: PMC12054796.
42: Petro-Turnquist EM, Madapong A, Pekarek M, Steffen D, Weaver EA. Epitope-
optimized vaccine elicits enduring immunity against swine influenza A virus. Nat
Commun. 2025 Apr 30;16(1):4046. doi: 10.1038/s41467-025-59182-7. PMID: 40301303;
PMCID: PMC12041224.
43: Fang W, Yoo D, Li W, Vu H. Toward a better understanding of genetic
diversity and more effective control strategies of major swine viral diseases.
Virology. 2025 May;606:110480. doi: 10.1016/j.virol.2025.110480. Epub 2025 Mar
1. PMID: 40064570.
44: Durazo-Martínez K, Chaudhari J, Sherry LM, Webster DA, Martins K, Bostrom
JR, Carlson DF, Sonstegard TS, Vu HLX. Modification of the splice acceptor in
CD163 exon 7 of pigs is insufficient to confer resistance to PRRSV. Vet
Microbiol. 2025 May;304:110450. doi: 10.1016/j.vetmic.2025.110450. Epub 2025 Mar
5. PMID: 40073612.
45: Wallis ZK, Midkiff CC, Zhao M, Kim SO, Amadeck A, Wang Y, Jakubowski M,
Burdo T, Miller AD, Li Q, Alvarez X, Blair RV, Williams KC. Resolving
Inflammation: The Impact of Antiretroviral Therapy on Macrophage Traffic In and
Out of the CNS. bioRxiv [Preprint]. 2025 May 8:2025.05.02.651872. doi:
10.1101/2025.05.02.651872. Update in: PLoS Pathog. 2025 Dec 1;21(12):e1013180.
doi: 10.1371/journal.ppat.1013180. PMID: 40655017; PMCID: PMC12248015.
46: Xu X, Niu M, Lamberty BG, Emanuel K, Estrella LD, Fox HS. T cell-mediated
SIV dissemination into the CNS: a single-cell transcriptomic analysis. Res Sq
[Preprint]. 2025 May 9:rs.3.rs-6537361. doi: 10.21203/rs.3.rs-6537361/v1. Update
in: J Neuroinflammation. 2025 Oct 8;22(1):226. doi: 10.1186/s12974-025-03543-y.
PMID: 40386405; PMCID: PMC12083692.
47: Jackson MK, Wang B, Rasmussen H, Natarajan SK, Bilek LD, Ehlers DK, Graeff-
Armas L, D'Angelo C, Cochran T, Harp K, Hanson C. Urinary metabolites as
biomarkers of dietary intake: a systematic review. Front Nutr. 2025 May
15;12:1596543. doi: 10.3389/fnut.2025.1596543. PMID: 40444248; PMCID:
PMC12119289.
48: Lai DC, Nguyen TN, Poonsuk K, McVey DS, Vu HLX. Lipid nanoparticle-
encapsulated DNA vaccine encoding African swine fever virus p54 antigen elicits
robust immune responses in pigs. Vet Microbiol. 2025 Jun;305:110508. doi:
10.1016/j.vetmic.2025.110508. Epub 2025 Apr 7. PMID: 40250107.
49: Acharya A, Byrareddy SN. Immunological insights into the re-emergence of
human metapneumovirus. Curr Opin Immunol. 2025 Jun;94:102562. doi:
10.1016/j.coi.2025.102562. Epub 2025 May 12. PMID: 40359650; PMCID: PMC12166946.
50: Oludipe DB, Du X, Akter S, Zhang C, Lee Mosley R, Gendelman HE, Sil S.
Innate Immunity and Parkinson's Disease. Cold Spring Harb Perspect Med. 2025 Jun
16:a041640. doi: 10.1101/cshperspect.a041640. Epub ahead of print. PMID:
40523778.
51: Wang LL, Keiser P, Yang D, Seravalli J, Patten JJ, Eaton B, Anderson D, Liu
Y, Holbrook MR, Smith AB 3rd, Davey RA, Xiang SH. Soluble CD4 inhibits Ebola
virus infection by targeting endosomal receptor-binding site. iScience. 2025 May
2;28(6):112573. doi: 10.1016/j.isci.2025.112573. PMID: 40491485; PMCID:
PMC12148371.
52: Du X, Akter S, Oludipe DB, Sil S, Zhang C, Gendelman HE, Mosley RL. Adaptive
immunity in the pathogenesis and treatments of Parkinson's disease. NeuroImmune
Pharm Ther. 2025 Jun 20;4(2):273-284. doi: 10.1515/nipt-2025-0008. PMID:
40740678; PMCID: PMC12304880.
53: Basova LV, Lim WL, Delorme-Walker V, Riley T, Au K, Lima DS, Lusic M, Ellis
RJ, Fox HS, Marcondes MCG. A Single-Cell Perspective on the Effects of Dopamine
in the Regulation of HIV Latency Phenotypes in a Myeloid Cell Model. Viruses.
2025 Jun 25;17(7):895. doi: 10.3390/v17070895. PMID: 40733513; PMCID:
PMC12299422.
54: Zimmerman N, Marta A, Baker C, Korade Z, Mirnics K, Shibata A. Investigating
Psychopharmaceutical Effects on Early Vertebrate Development Using a Zebrafish
Model System. J Dev Biol. 2025 Jun 27;13(3):22. doi: 10.3390/jdb13030022. PMID:
40700140; PMCID: PMC12286116.
55: Fernando SC, Adams S, Lakamp A, Spangler ML. International Symposium on
Ruminant Physiology: Stochastic and deterministic factors that shape the rumen
microbiome. J Dairy Sci. 2025 Jul;108(7):7576-7590. doi: 10.3168/jds.2024-25797.
Epub 2025 Mar 3. PMID: 40043768.
56: Van Etten JL, Agarkova IV, Dunigan DD, Shao Q, Fang Q. Emerging structure of
chlorovirus PBCV-1. Virology. 2025 Jul;608:110552. doi:
10.1016/j.virol.2025.110552. Epub 2025 Apr 22. PMID: 40286469.
57: Channer B, Daniali M, Sheldon L, Emanuel K, Agarwal Y, Kist T, Murphy BJ,
Niu M, Dampier W, Fox H, Gaskill PJ. Microenvironmental conditions and serum
availability alter primary human macrophage NF-κB inflammatory response and
function. J Leukoc Biol. 2025 Jul 9;117(7):qiaf071. doi: 10.1093/jleuko/qiaf071.
PMID: 40401596; PMCID: PMC12239098.
58: Natarajan SK, Zheng H, Chandra S, Schultz HD, Chen WCW. Editorial: Frontiers
in the midlands society of physiological sciences (2023-2024). Front Physiol.
2025 Jul 9;16:1654264. doi: 10.3389/fphys.2025.1654264. PMID: 40704288; PMCID:
PMC12283678.
59: Zhang C, Li H, Poluektova LY, Gendelman HE, Dash PK. Unique molecular
signatures in rebound viruses from antiretroviral drug and CRISPR-treated
HIV-1-infected humanized mice. Commun Biol. 2025 Jul 19;8(1):1077. doi:
10.1038/s42003-025-08499-6. PMID: 40683956; PMCID: PMC12276314.
60: Mone K, Singh S, Abdullatif F, Sur M, Rasquinha MT, Seravalli J, Zinniel DK,
Mukhopadhyay I, Barletta RG, Gebregiworgis T, Reddy J. Immunization with
Complete Freund's Adjuvant Reveals Trained Immunity-like Features in A/J Mice.
Vaccines (Basel). 2025 Jul 21;13(7):768. doi: 10.3390/vaccines13070768. PMID:
40733745; PMCID: PMC12300380.
61: Chakraborty C, Bhattacharya M, Chatterjee S, Lee SS, Bhattacharya P, Ohimain
EI, Wen ZH, Das A, Rai A, Abdelhameed AS, Agoramoorthy G, Zayed H, Byrareddy SN.
Comprehensive global-scale evaluation of the COVID-19 pandemic associated with
234 countries, territories, and sub-national locations during 2020-2024. Folia
Microbiol (Praha). 2025 Jul 30. doi: 10.1007/s12223-025-01299-9. Epub ahead of
print. PMID: 40736939.
62: Klug EA, Rivera DN, Herrera VL, Ravnholdt AR, Ackerman DN, Yu Y, Ye C,
Bradfute SB, Reid SP, Santarpia JL. Aerostability of Sin Nombre Virus Aerosol
Related to Near-Field Transmission. Pathogens. 2025 Jul 30;14(8):750. doi:
10.3390/pathogens14080750. PMID: 40872260; PMCID: PMC12389459.
63: Rauh O, Schulze T, Van Etten JL, Thiel G, Moroni A. Modular architecture of
K<sup>+</sup> channels: the functional plasticity of the pore module. EMBO Rep.
2025 Aug;26(15):3730-3746. doi: 10.1038/s44319-025-00519-0. Epub 2025 Jul 15.
PMID: 40664719; PMCID: PMC12332018.
64: Raut SS, Das S, Bybee G, Chava H, Ogunnaike M, Wang W, Pathania AS, Hanson
BW, Le NTH, Cohen SM, Gendelman HE, Poluektova LY, Edagwa BJ, Osna NA. A
scalable ultra-long-acting tenofovir phosphonate prodrug sustains HBV
suppression. Sci Adv. 2025 Aug;11(31):eadw2286. doi: 10.1126/sciadv.adw2286.
Epub 2025 Aug 1. PMID: 40749058; PMCID: PMC12315950.
65: Souza JW, Henriques LR, Carlson RM, Botelho BBF, Carvalho JVRP, Santos JPN,
Aguiar ERGR, Agarkova IV, Van Etten JL, Dunigan DD, Rodrigues RAL. New Isolates
of Betachloroviruses Shed Light on the Diversity and Biological Complexity of an
Unexplored Group of Giant Algal Viruses. Viruses. 2025 Aug 8;17(8):1096. doi:
10.3390/v17081096. PMID: 40872810; PMCID: PMC12390592.
66: Madapong A, Wiggins J, DeBeauchamp J, Webby RJ, Weaver EA. Systemic and
Mucosal Immune Responses Induced by Adenoviral-Vectored Consensus H5 Influenza A
Vaccines in Mice and Swine. Vaccines (Basel). 2025 Aug 30;13(9):928. doi:
10.3390/vaccines13090928. PMID: 41012131; PMCID: PMC12474482.
67: Angell KE, Jarnefeld J, Schiffman EK, Broadhurst MJ, Dong JJ, Degarege A,
Cortinas R, Brett-Major DM. Active and Passive Vector Surveillance Systems in
Lyme Endemic Minnesota and Their Correlation to Human Disease. J Public Health
Manag Pract. 2025 Sep-Oct 01;31(5):877-885. doi: 10.1097/PHH.0000000000002140.
Epub 2025 Jul 17. PMID: 40029793.
68: Panja S, Kapoor E, Siddhanta K, Jogdeo CM, Sil D, Khan RI, Kumari N, Ding L,
Gendelman HE, Singh AB, Oupický D. Bioactive polymers as stimulus-responsive
anti-metastatic combination agents to treat pancreatic cancer. Biomaterials.
2025 Sep;320:123255. doi: 10.1016/j.biomaterials.2025.123255. Epub 2025 Mar 13.
PMID: 40107179.
69: Panja S, Zaman LA, Zhang C, Patel M, Gorantla S, Dash PK, Gendelman HE.
Lymphoid and CXCR4 Cell Targeted Lipid Nanoparticles Facilitate HIV-1 Proviral
DNA Excision. Adv Healthc Mater. 2025 Sep;14(25):e2501190. doi:
10.1002/adhm.202501190. Epub 2025 Jul 14. PMID: 40653915; PMCID: PMC12477575.
70: Li X, Liu B, Sekar D, Sur M, Reddy J, Natarajan SK, Lund PJ, Yu J. Shiitake
Mushroom-Derived Vesicle-like Nanoparticles Improve Cognitive Function and
Reshape Gut Microbiota and Fecal Metabolome in Aged Mice. Nutrients. 2025 Sep
8;17(17):2902. doi: 10.3390/nu17172902. PMID: 40944290; PMCID: PMC12430123.
71: Weiselberg J, Niu M, Hernandez CA, Fox HS, Calderon TM, Berman JW.
Methamphetamine Induces Metallothionein 1 Expression and an Inflammatory
Phenotype in Primary Human HIV-Infected Macrophages. Int J Mol Sci. 2025 Sep
12;26(18):8875. doi: 10.3390/ijms26188875. PMID: 41009444; PMCID: PMC12470063.
72: Uprety T, Sreenivasan CC, Yu J, Zhao M, Liu R, Yu H, Naveed A, Eertink LG,
Soni S, Ruby RE, Chen X, Kaushik RS, Sheng Z, Li Q, Wang D, Li F. Differential
tissue tropism and transmission efficiency of two dominant influenza D clades
with overlapping but distinct receptor binding fine specificities in ferrets.
PLoS Pathog. 2025 Sep 15;21(9):e1013493. doi: 10.1371/journal.ppat.1013493.
PMID: 40953060; PMCID: PMC12435653.
73: Premeaux TA, Yeung ST, Johnson SD, Moar P, Byrareddy SN, Ndhlovu LC. Altered
distribution of tissue galectins correlates with mucosal dysregulation in SIV
infection. J Immunol. 2025 Sep 15:vkaf200. doi: 10.1093/jimmun/vkaf200. Epub
ahead of print. PMID: 40971874.
74: Selvavinayagam ST, Anusree A, Yong YK, Sankar S, Frederick A, Rajeshkumar M,
Kumar MS, Sampath P, Sankar G, Roy CL, Karishma SJ, Murugesan A, Balakrishnan P,
Govindaraj S, Byrareddy SN, Velu V, Shankar EM, Larsson M, Kannan M, Raju S.
Clinical laboratory analytes and platelet-associated parameters as surrogate
markers of subclinical inflammation in latent tuberculosis infection. Front
Immunol. 2025 Sep 17;16:1662454. doi: 10.3389/fimmu.2025.1662454. PMID:
41041335; PMCID: PMC12484228.
75: Yan C, Hughes ML, Crawford LB, Cantu-Hines M, George RM, Dev DA, Bashford
GR. Health equity in Nebraska: addressing disparities through place-based policy
innovation. Front Public Health. 2025 Sep 17;13:1651092. doi:
10.3389/fpubh.2025.1651092. PMID: 41041372; PMCID: PMC12484117.
76: Fox H, Xu X, Niu M, Lamberty B, Emanuel K, Callen S, Buch S, Acharya A,
Byrareddy S. Opioid-induced immunosuppression of brain myeloid cells in SIV-
infected rhesus macaques. Res Sq [Preprint]. 2025 Sep 18:rs.3.rs-7394731. doi:
10.21203/rs.3.rs-7394731/v1. PMID: 41001524; PMCID: PMC12458567.
77: Gomaa AE, Garcia-Ruiz H. Genome-Wide Variation Profile of the Genus
<i>Tobamovirus</i>. Viruses. 2025 Sep 22;17(9):1284. doi: 10.3390/v17091284.
PMID: 41012710; PMCID: PMC12474338.
78: Watson SC, Aluthge ND, Furbeck RA, Fernando SC, Chaves BD, Sullivan GA.
Impact of organic acid treatment on the microbial community composition of raw
beef during extended refrigerated storage. Food Microbiol. 2025 Oct;131:104787.
doi: 10.1016/j.fm.2025.104787. Epub 2025 Apr 4. PMID: 40484517.
79: Carpenter TK, McCashland M, Sherrick R, Natarajan SK, Mandić M, Kachman SD,
von Walden F, Vechetti IJ, Fernandez-Gonzalo R. The effects of aerobic and
resistance exercise on the lipid profile of extracellular vesicles. Eur J Appl
Physiol. 2025 Oct 1. doi: 10.1007/s00421-025-05973-1. Epub ahead of print. PMID:
41034431.
80: Guo W, Dong R, Okedigba AO, Sanchez JE, Agarkova IV, Abisamra EM, Jelinsky
A, Riekhof W, Noor L, Dunigan DD, Van Etten JL, Capelluto DGS, Xiao C, Li L.
Membrane Composition Modulates Vp54 Binding: A Combined Experimental and
Computational Study. Pathogens. 2025 Oct 3;14(10):1000. doi:
10.3390/pathogens14101000. PMID: 41156611; PMCID: PMC12566899.
81: Yuan Z, Board NL, Zhao M, Zu G, Sengupta S, Li Q, Siliciano JD, Siliciano
RF, Montaner LJ. A TCR-mimic bispecific antibody reduces HIV-1 provirus and
delays viral rebound in HLA-matched humanized mice. bioRxiv [Preprint]. 2025 Oct
6:2025.10.06.680344. doi: 10.1101/2025.10.06.680344. PMID: 41279654; PMCID:
PMC12632495.
82: Xu X, Niu M, Lamberty BG, Emanuel K, Estrella LD, Fox HS. T cell-mediated
SIV dissemination into the CNS: a single-cell transcriptomic analysis. J
Neuroinflammation. 2025 Oct 8;22(1):226. doi: 10.1186/s12974-025-03543-y. PMID:
41063314; PMCID: PMC12509402.
83: Vasquez-Gutierrez U, Frias-Treviño GA, Aguirre-Uribe LA, Ramírez-Barrón SN,
Mendez-Lozano J, Hernández-Juárez A, García-Ruíz H. Nanoparticles and
Nanocarriers for Managing Plant Viral Diseases. Plants (Basel). 2025 Oct
10;14(20):3118. doi: 10.3390/plants14203118. PMID: 41157677; PMCID: PMC12567292.
84: Xu C, Yu Y, Khadakkar G, Xie J, Xu D, Yao Q. Multimodal knowledge expansion
widget powered by plant protein phosphorylation database and ChatGPT. Front
Bioinform. 2025 Oct 15;5:1687687. doi: 10.3389/fbinf.2025.1687687. PMID:
41169664; PMCID: PMC12568720.
85: Freed S Jr, Chandler S, Davis E, Herzog KS, Pella Z, Burkhalter K, McCutchen
EL, Bartling AM, Broadhurst MJ, Hughes HR, Brault AC, Iwen PC, Connelly R, Hamik
J, Fauver J. Retrospective West Nile Virus Lineage 3 Surveillance in Culex
Mosquitoes: Nebraska, USA 2012-2024. Am J Trop Med Hyg. 2025 Oct
23;113(6):1415–8. doi: 10.4269/ajtmh.25-0383. Epub ahead of print. PMID:
41130196; PMCID: PMC12676604.
86: Denton PW, Akkina R, Gendelman HE, Koblinski JE, Wahl A, Gorantla S. The
promise and perils of humanized mice: workshop report from the 29th scientific
conference of the society on NeuroImmune pharmacology (SNIP). NeuroImmune Pharm
Ther. 2025 Oct 24;4(3):315-324. doi: 10.1515/nipt-2025-0014. PMID: 41221300;
PMCID: PMC12601220.
87: Summerlin M, Uberti MG, Shinde D, Foster EG, Sillman B, Kumar M, Yao B, Peng
D, Edagwa BJ, Gendelman HE, Liu Y, Bade AN. CEST MRI detects antiretroviral drug
toxicities in the developing mouse brain. Front Pharmacol. 2025 Oct
29;16:1681094. doi: 10.3389/fphar.2025.1681094. PMID: 41235110; PMCID:
PMC12605090.
88: Lakamp A, Adams S, Kuehn L, Snelling W, Wells J, Hales K, Neville B,
Fernando S, Spangler ML. Prediction accuracy for feed intake and body weight
gain using host genomic and rumen metagenomic data in beef cattle. Genet Sel
Evol. 2025 Oct 30;57(1):64. doi: 10.1186/s12711-025-01007-8. PMID: 41168702;
PMCID: PMC12577351.
89: Nguyen NM, Athota P, Flores A, Trease A, Meyer D, Singu VK, Krishnamoorthy
C, Schaal VL, Bhakat R, Sualy K, Natarajan SK, Stauch K, Yelamanchili SV,
Pendyala G. Comprehensive characterization of chronic midazolam exposure on
neonates and long-term neurodevelopment. Mol Psychiatry. 2025
Nov;30(11):5203-5214. doi: 10.1038/s41380-025-03104-y. Epub 2025 Jul 9. PMID:
40634532; PMCID: PMC12532581.
90: Akbar A, Drakowski R, VanOrmer M, Rapoza R, Hahka T, Freel C, Natarajan SK,
Thoene M, Hanson C, Anderson-Berry A, Mauch T. Relationship Between Maternal
Plasma Retinol and Provitamin A Carotenoids With Fetal and Infant Kidney
Development: A Comprehensive Analysis. J Ren Nutr. 2025 Nov;35(6):708-717. doi:
10.1053/j.jrn.2025.07.006. Epub 2025 Jul 21. PMID: 40701306.
91: Gendelman HE, Hu G, Yeapuri P, Srivastava S, Mosley RL, Mamilla S, Intrator
W, Are MS, Sackstein R. Regulatory T cell α(1,3)-exofucosylation for treatment
of neurodegenerative diseases. J Leukoc Biol. 2025 Nov 4;117(11):qiaf154. doi:
10.1093/jleuko/qiaf154. PMID: 41165165.
92: Singh S, Sur M, Mone K, Ayad CW, Massilamany C, Gangaplara A, Reddy J. Bulk
RNAseq Analysis of Cardiac Myosin-Specific CD4<sup>+</sup> and CD8<sup>+</sup> T
Cells Reveals Distinct Transcriptomic Profiles Between Myocarditis-Resistant and
Susceptible Mice. Biomedicines. 2025 Nov 6;13(11):2725. doi:
10.3390/biomedicines13112725. PMID: 41301818; PMCID: PMC12650461.
93: Angell KE, George DS, Broadhurst MJ, Brett-Major DM. Sensitivity analysis of
limit of detection estimation using probit regression. Am J Clin Pathol. 2025
Nov 15:aqaf123. doi: 10.1093/ajcp/aqaf123. Epub ahead of print. PMID: 41240387.
94: Angell KE, Broadhurst MJ, Dong JJ, Michaud TL, Degarege A, Cortinas R,
Brett-Major DM. Quantifying the Public Health Impact of Lyme Disease in
Minnesota: A Simulation Analysis of Reported and Unreported Cases. J Health Econ
Outcomes Res. 2025 Nov 20;12(2):221-228. doi: 10.36469/001c.146618. PMID:
41278304; PMCID: PMC12640196.
95: Lai DC, Nguyen TN, Trinh GP, Steffen D, Vu HLX. Lipid nanoparticle-
encapsulated DNA vaccine induces balanced antibody and T-cell responses in pigs
with maternally derived antibodies. J Virol. 2025 Nov 25;99(11):e0112325. doi:
10.1128/jvi.01123-25. Epub 2025 Oct 9. PMID: 41065389; PMCID: PMC12645943.
96: Rodrigues RAL, Carvalho JVRP, Henriques LR, Dunigan DD, L Van Etten J.
Taxonomic update for the giant algal chloroviruses of the family
Phycodnaviridae. Arch Virol. 2025 Nov 29;171(1):10. doi:
10.1007/s00705-025-06475-3. PMID: 41317198.
97: Acharya A, Sutar D, Mohan M, Govind V, Villinger F, Pallikkuth S, Byrareddy
SN. Age-Associated Expansion of HIV/SIV Reservoirs in People With HIV and SIV-
Infected Macaques. Aging Cell. 2025 Dec;24(12):e70252. doi: 10.1111/acel.70252.
Epub 2025 Oct 6. PMID: 41051053; PMCID: PMC12686580.
98: Wallis ZK, Midkiff CC, Zhao M, Autissier P, Kim SO, Amadeck AQ, Wang Y,
Jakubowski M, Burdo TH, Miller AD, Li Q, Alvarez X, Blair RV, Williams KC.
Resolving inflammation: The impact of antiretroviral therapy on macrophage
traffic in and out of the CNS. PLoS Pathog. 2025 Dec 1;21(12):e1013180. doi:
10.1371/journal.ppat.1013180. PMID: 41325462; PMCID: PMC12677798.
99: Dhakal J, Whitmore V, Chaudhari J, Vu H, Chaves BD. Fomite Persistence of
the Porcine Reproductive and Respiratory Syndrome Virus is Affected by Relative
Humidity and Storage Temperature. Food Environ Virol. 2025 Dec 8;17(4):58. doi:
10.1007/s12560-025-09670-2. PMID: 41359072.
100: Hu G, Gogzheyan C, Panja S, Sil S, Gendelman HE. Extracellular vesicle-
based therapies for neurodegenerative diseases. NeuroImmune Pharm Ther. 2025 Dec
19;4(4):377-390. doi: 10.1515/nipt-2025-0016. PMID: 41480618; PMCID:
PMC12755078.
101: Adams S, Lakamp A, Aluthge N, Laible E, Loy JD, Spangler ML, Fernando SC.
Investigating the establishment of the rumen and oral bacterial communities in
beef cattle and assessing the applicability of using the oral bacterial
community composition as a proxy for rumen bacterial community structure in
cattle. Front Microbiol. 2025 Dec 19;16:1667498. doi:
10.3389/fmicb.2025.1667498. PMID: 41488298; PMCID: PMC12757392.
102: Saeng-Chuto K, Wang Z, Krueger AC, Bargeron K, Wiebe MS. A novel antiviral
role of ankyrin repeat and LEM domain-containing 2 (ANKLE2) in restricting
vaccinia virus through barrier to autointegration factor (BAF). J Virol. 2025
Dec 23;99(12):e0154925. doi: 10.1128/jvi.01549-25. Epub 2025 Nov 18. PMID:
41251347; PMCID: PMC12724269.
2026
1: Zhang C, Chaudhary BN, Ali MU, Heser MG, Patel SS, Du X, Dey SS, Mosley RL,
Panja S, Gendelman HE. Searching for a HIV-1 Cure. Theranostics. 2026 Jan
1;16(5):2170-2191. doi: 10.7150/thno.124358. PMID: 41424846; PMCID: PMC12712796.
Nebraska Center for Virology groups published 102 papers in 2025.
A word cloud of NCV research publication topics in the last 5 years (January 1, 2019 - September 5, 2024).
Past Publications by NCV members
2023
1: Kumari S, Chaudhari J, Huang Q, Gauger P, De Almeida MN, Ly H, Liang Y, Vu
HLX. Assessment of Immune Responses to a Trivalent Pichinde Virus-Vectored
Vaccine Expressing Hemagglutinin Genes from Three Co-Circulating Influenza A
Virus Subtypes in Pigs. Vaccines (Basel). 2023 Dec 2;11(12):1806. doi:
10.3390/vaccines11121806. PMID: 38140210; PMCID: PMC10748346.
2: Lievens EJP, Agarkova IV, Dunigan DD, Van Etten JL, Becks L. Efficient assays
to quantify the life history traits of algal viruses. Appl Environ Microbiol.
2023 Dec 21;89(12):e0165923. doi: 10.1128/aem.01659-23. Epub 2023 Nov 21. PMID:
38092674; PMCID: PMC10734466.
3: Solis-Leal A, Boby N, Mallick S, Cheng Y, Wu F, De La Torre G, Dufour J,
Alvarez X, Shivanna V, Liu Y, Fennessey CM, Lifson JD, Li Q, Keele BF, Ling B.
Lymphoid tissues contribute to plasma viral clonotypes early after
antiretroviral therapy interruption in SIV-infected rhesus macaques. Sci Transl
Med. 2023 Dec 13;15(726):eadi9867. doi: 10.1126/scitranslmed.adi9867. Epub 2023
Dec 13. PMID: 38091409; PMCID: PMC11244655.
4: Wiggins J, Nguyen N, Wei W, Wang LL, Hollingsead Olson H, Xiang SH. Lactic
acid bacterial surface display of scytovirin inhibitors for anti-ebolavirus
infection. Front Microbiol. 2023 Nov 23;14:1269869. doi:
10.3389/fmicb.2023.1269869. PMID: 38075878; PMCID: PMC10704896.
5: Walker LR, Vu HL, Montooth KL, Ciobanu DC. Functional and evolutionary
analysis of host Synaptogyrin-2 in porcine circovirus type 2 susceptibility.
PLoS Genet. 2023 Nov 27;19(11):e1011029. doi: 10.1371/journal.pgen.1011029.
PMID: 38011217; PMCID: PMC10703400.
6: Luong HQ, Lai HTL, Truong LQ, Nguyen TN, Vu HD, Nguyen HT, Nguyen LT, Pham
TH, McVey DS, Vu HLX. Comparative Analysis of Swine Antibody Responses following
Vaccination with Live-Attenuated and Killed African Swine Fever Virus Vaccines.
Vaccines (Basel). 2023 Nov 3;11(11):1687. doi: 10.3390/vaccines11111687. PMID:
38006019; PMCID: PMC10674706.
7: Hurst JP, Sato S, Ferris T, Yobi A, Zhou Y, Angelovici R, Clemente TE,
Holding DR. Editing the 19 kDa alpha-zein gene family generates non-
opaque2-based quality protein maize. Plant Biotechnol J. 2024 Apr;22(4):946-959.
doi: 10.1111/pbi.14237. Epub 2023 Nov 21. PMID: 37988568; PMCID: PMC10955486.
8: Delhon G, Khatiwada S, Doub D, Harris S, Chaulagain S, El-Gaffary M, Rock DL.
Bovine papular stomatitis virus as a vaccine vector for cattle. J Gen Virol.
2023 Nov;104(11):001914. doi: 10.1099/jgv.0.001914. PMID: 37976092; PMCID:
PMC10768693.
9: White KS, Walker JA, Wang J, Autissier P, Miller AD, Abuelezan NN, Burrack R,
Li Q, Kim WK, Williams KC. Simian immunodeficiency virus-infected rhesus
macaques with AIDS co-develop cardiovascular pathology and encephalitis. Front
Immunol. 2023 Oct 27;14:1240946. doi: 10.3389/fimmu.2023.1240946. PMID:
37965349; PMCID: PMC10641955.
10: Julius P, Kang G, Siyumbwa S, Musumali J, Tso FY, Ngalamika O, Kaile T,
Maate F, Moonga P, West JT, Angeletti P, Wood C. Co-infection and co-
localization of Kaposi sarcoma-associated herpesvirus and Epstein-Barr virus in
HIV-associated Kaposi sarcoma: a case report. Front Cell Infect Microbiol. 2023
Oct 20;13:1270935. doi: 10.3389/fcimb.2023.1270935. PMID: 37928187; PMCID:
PMC10623342.
11: McMahon-Cole H, Johnson A, Sadat Aghamiri S, Helikar T, Crawford LB.
Modeling and Remodeling the Cell: How Digital Twins and HCMV Can Elucidate the
Complex Interactions of Viral Latency, Epigenetic Regulation, and Immune
Responses. Curr Clin Microbiol Rep. 2023 Sep;10(3):141-151. doi:
10.1007/s40588-023-00201-w. Epub 2023 Jul 29. PMID: 37901689; PMCID:
PMC10601359.
12: Nguyen TN, Kumari S, Sillman S, Chaudhari J, Lai DC, Vu HLX. A Single-Dose
Intramuscular Immunization of Pigs with Lipid Nanoparticle DNA Vaccines Based on
the Hemagglutinin Antigen Confers Complete Protection against Challenge
Infection with the Homologous Influenza Virus Strain. Vaccines (Basel). 2023 Oct
15;11(10):1596. doi: 10.3390/vaccines11101596. PMID: 37896997; PMCID:
PMC10611089.
13: Pekarek MJ, Weaver EA. Existing Evidence for Influenza B Virus Adaptations
to Drive Replication in Humans as the Primary Host. Viruses. 2023 Sep
30;15(10):2032. doi: 10.3390/v15102032. PMID: 37896807; PMCID: PMC10612074.
14: Sur M, Rasquinha MT, Arumugam R, Massilamany C, Gangaplara A, Mone K,
Lasrado N, Yalaka B, Doiphode A, Gurumurthy C, Steffen D, Reddy J. Transgenic
Mice Expressing Functional TCRs Specific to Cardiac Myhc-α 334-352 on Both CD4
and CD8 T Cells Are Resistant to the Development of Myocarditis on C57BL/6
Genetic Background. Cells. 2023 Sep 25;12(19):2346. doi: 10.3390/cells12192346.
PMID: 37830560; PMCID: PMC10571761.
15: Keynia S, Jaafar L, Zhou Y, Anderson CT, Turner JA. Stomatal opening
efficiency is controlled by cell wall organization in <i>Arabidopsis
thaliana</i>. PNAS Nexus. 2023 Sep 11;2(9):pgad294. doi:
10.1093/pnasnexus/pgad294. PMID: 37731948; PMCID: PMC10508357.
16: Mone K, Reddy J. The knowns and unknowns of cardiac autoimmunity in viral
myocarditis. Rev Med Virol. 2023 Nov;33(6):e2478. doi: 10.1002/rmv.2478. Epub
2023 Sep 2. PMID: 37658748.
17: Ho HVN, Dunigan DD, Salsbery ME, Agarkova IV, Al Ameeli Z, Van Etten JL,
DeLong JP. Viral Chemotaxis of Paramecium Bursaria Altered by Algal
Endosymbionts. Microb Ecol. 2023 Nov;86(4):2904-2909. doi:
10.1007/s00248-023-02292-w. Epub 2023 Aug 31. PMID: 37650927.
18: Neltner TJ, Sahoo PK, Smith RW, Anders JPV, Arnett JE, Ortega DG, Schmidt
RJ, Johnson GO, Natarajan SK, Housh TJ. Effects of High-Intensity, Eccentric-
Only Muscle Actions on Serum Biomarkers of Collagen Degradation and Synthesis. J
Strength Cond Res. 2023 Sep 1;37(9):1729-1737. doi:
10.1519/JSC.0000000000004457. PMID: 37616533.
19: Engel AJ, Paech S, Langhans M, van Etten JL, Moroni A, Thiel G, Rauh O.
Combination of hydrophobicity and codon usage bias determines sorting of model
K<sup>+</sup> channel protein to either mitochondria or endoplasmic reticulum.
Traffic. 2023 Nov;24(11):533-545. doi: 10.1111/tra.12915. Epub 2023 Aug 14.
PMID: 37578147.
20: Jiang Y, Angeletti PC, Hoffman AJ. Investigating the Physiological
Mechanisms between Resistance Training and Pain Relief in the Cancer Population:
A Literature Review. J Cancer Ther. 2023 Feb;14(2):80-101. doi:
10.4236/jct.2023.142008. Epub 2023 Feb 28. PMID: 37502393; PMCID: PMC10373509.
21: Julius P, Siyumbwa SN, Maate F, Moonga P, Kang G, Kaile T, West JT, Wood C,
Angeletti PC. Yes-associated protein-1 overexpression in ocular surface squamous
neoplasia; a potential diagnostic marker and therapeutic target. Front Oncol.
2023 Jul 5;13:1213426. doi: 10.3389/fonc.2023.1213426. PMID: 37476371; PMCID:
PMC10354641.
22: Sexton NR, Cline PJ, Gallichotte EN, Fitzmeyer E, Young MC, Janich AJ,
Pabilonia KL, Ehrhart N, Ebel GD. SARS-CoV-2 entry into and evolution within a
skilled nursing facility. Sci Rep. 2023 Jul 19;13(1):11657. doi:
10.1038/s41598-023-38544-5. PMID: 37468595; PMCID: PMC10356950.
23: Parperides E, El Mounadi K, Garcia-Ruiz H. Induction and suppression of gene
silencing in plants by nonviral microbes. Mol Plant Pathol. 2023
Oct;24(10):1347-1356. doi: 10.1111/mpp.13362. Epub 2023 Jul 12. PMID: 37438989;
PMCID: PMC10502822.
24: Long NS, Hales KE, Berry ED, Legako JF, Woerner DR, Broadway PR, Carroll JA,
Burdick Sanchez NC, Fernando SC, Wells JE. Antibimicrobial Susceptibility of
Trimethoprim-Sulfamethoxazole and 3rd-Generation Cephalosporin-Resistant
<i>Escherichia coli</i> Isolates Enumerated Longitudinally from Feedlot Arrival
to Harvest in High-Risk Beef Cattle Administered Common Metaphylactic
Antimicrobials. Foodborne Pathog Dis. 2023 Jul;20(7):252-260. doi:
10.1089/fpd.2023.0001. Epub 2023 Jun 29. PMID: 37384919.
25: Esmael A, Agarkova IV, Dunigan DD, Zhou Y, Van Etten JL. Viral DNA
Accumulation Regulates Replication Efficiency of <i>Chlorovirus</i> OSy-NE5 in
Two Closely Related <i>Chlorella variabilis</i> Strains. Viruses. 2023 Jun
9;15(6):1341. doi: 10.3390/v15061341. PMID: 37376640; PMCID: PMC10302427.
26: Crawford LB. Hematopoietic stem cells and betaherpesvirus latency. Front
Cell Infect Microbiol. 2023 Jun 6;13:1189805. doi: 10.3389/fcimb.2023.1189805.
PMID: 37346032; PMCID: PMC10279960.
27: Zilbauer M, James KR, Kaur M, Pott S, Li Z, Burger A, Thiagarajah JR,
Burclaff J, Jahnsen FL, Perrone F, Ross AD, Matteoli G, Stakenborg N, Sujino T,
Moor A, Bartolome-Casado R, Bækkevold ES, Zhou R, Xie B, Lau KS, Din S, Magness
ST, Yao Q, Beyaz S, Arends M, Denadai-Souza A, Coburn LA, Gaublomme JT, Baldock
R, Papatheodorou I, Ordovas-Montanes J, Boeckxstaens G, Hupalowska A, Teichmann
SA, Regev A, Xavier RJ, Simmons A, Snyder MP, Wilson KT; Gut Cell Atlas
Consortium; Human Cell Atlas Gut Biological Network Consortium. A Roadmap for
the Human Gut Cell Atlas. Nat Rev Gastroenterol Hepatol. 2023 Sep;20(9):597-614.
doi: 10.1038/s41575-023-00784-1. Epub 2023 May 31. PMID: 37258747; PMCID:
PMC10527367.
28: Petro-Turnquist E, Pekarek M, Jeanjaquet N, Wooledge C, Steffen D, Vu H,
Weaver EA. Adenoviral-vectored epigraph vaccine elicits robust, durable, and
protective immunity against H3 influenza A virus in swine. Front Immunol. 2023
May 15;14:1143451. doi: 10.3389/fimmu.2023.1143451. PMID: 37256131; PMCID:
PMC10225514.
29: Eaton CW, Vu HL, Hodges AL, Harris SP, Kachman SD, Ciobanu DC. Host-genetic-
based outcome of co-infection by PCV2b and PRRSV in pigs. J Anim Sci. 2023 Jan
3;101:skad164. doi: 10.1093/jas/skad164. PMID: 37210473; PMCID: PMC10284038.
30: Sreenivasan CC, Liu R, Gao R, Guo Y, Hause BM, Thomas M, Naveed A, Clement
T, Rausch D, Christopher-Hennings J, Nelson E, Druce J, Zhao M, Kaushik RS, Li
Q, Sheng Z, Wang D, Li F. Influenza C and D Viruses Demonstrated a Differential
Respiratory Tissue Tropism in a Comparative Pathogenesis Study in Guinea Pigs. J
Virol. 2023 Jun 29;97(6):e0035623. doi: 10.1128/jvi.00356-23. Epub 2023 May 18.
PMID: 37199648; PMCID: PMC10308911.
31: DeLong JP, Van Etten JL, Dunigan DD. Lessons from Chloroviruses: the Complex
and Diverse Roles of Viruses in Food Webs. J Virol. 2023 May 31;97(5):e0027523.
doi: 10.1128/jvi.00275-23. Epub 2023 May 1. PMID: 37133447; PMCID: PMC10231191.
32: Dunigan DD, Agarkova IV, Esmael A, Alvarez S, Van Etten JL. Early-Phase
Drive to the Precursor Pool: Chloroviruses Dive into the Deep End of Nucleotide
Metabolism. Viruses. 2023 Mar 31;15(4):911. doi: 10.3390/v15040911. PMID:
37112891; PMCID: PMC10142491.
33: Pattnaik A, Sahoo BR, Struble LR, Borgstahl GEO, Zhou Y, Franco R, Barletta
RG, Osorio FA, Petro TM, Pattnaik AK. A Ferritin Nanoparticle-Based Zika Virus
Vaccine Candidate Induces Robust Humoral and Cellular Immune Responses and
Protects Mice from Lethal Virus Challenge. Vaccines (Basel). 2023 Apr
10;11(4):821. doi: 10.3390/vaccines11040821. PMID: 37112733; PMCID: PMC10143468.
34: Bennett SJ, Davila CA, Reyes Z, Valentín-Acevedo A, Gocchi Carrasco K,
Abadie R, Marlin MC, Beel M, Chapple AG, Fernando S, Guthridge JM, Chiou KS,
Dombrowski K, West JT, Wood C. Immune profiling in Puerto Rican injection drug
users with and without HIV-1 infection. J Leukoc Biol. 2023 Jul
27;114(2):142-153. doi: 10.1093/jleuko/qiad045. PMID: 37042743; PMCID:
PMC10776106.
35: Watson SC, Furbeck RA, Fernando SC, Chaves BD, Sullivan GA. Spoilage
Pseudomonas survive common thermal processing schedules and grow in emulsified
meat during extended vacuum storage. J Food Sci. 2023 May;88(5):2162-2167. doi:
10.1111/1750-3841.16557. Epub 2023 Apr 7. PMID: 37026560.
36: Graham EH, Tom WA, Neujahr AC, Adamowicz MS, Clarke JL, Herr JR, Fernando
SC. The persistence and stabilization of auxiliary genes in the human skin
virome. Virol J. 2023 Mar 22;20(1):49. doi: 10.1186/s12985-023-02012-3. PMID:
36949545; PMCID: PMC10031188.
37: Kittana H, Gomes-Neto JC, Heck K, Juritsch AF, Sughroue J, Xian Y, Mantz S,
Segura Muñoz RR, Cody LA, Schmaltz RJ, Anderson CL, Moxley RA, Hostetter JM,
Fernando SC, Clarke J, Kachman SD, Cressler CE, Benson AK, Walter J, Ramer-Tait
AE. Evidence for a Causal Role for Escherichia coli Strains Identified as
Adherent-Invasive (AIEC) in Intestinal Inflammation. mSphere. 2023 Apr
20;8(2):e0047822. doi: 10.1128/msphere.00478-22. Epub 2023 Mar 8. PMID:
36883813; PMCID: PMC10117065.
38: Mone K, Lasrado N, Sur M, Reddy J. Vaccines against Group B Coxsackieviruses
and Their Importance. Vaccines (Basel). 2023 Jan 27;11(2):274. doi:
10.3390/vaccines11020274. PMID: 36851152; PMCID: PMC9961666.
39: Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q. Displaying
and delivering viral membrane antigens via WW domain-activated extracellular
vesicles. Sci Adv. 2023 Jan 27;9(4):eade2708. doi: 10.1126/sciadv.ade2708. Epub
2023 Jan 27. PMID: 36706192; PMCID: PMC9882979.
40: Drury S, Claussen G, Zetterman A, Moriyama H, Moriyama EN, Zhang L.
Evolution and emergence of primate-specific interferon regulatory factor 9. J
Med Virol. 2023 Feb;95(2):e28521. doi: 10.1002/jmv.28521. PMID: 36691924; PMCID:
PMC10107944.
41: Sahoo BR, Crook AA, Pattnaik A, Torres-Gerena AD, Khalimonchuk O, Powers R,
Franco R, Pattnaik AK. Redox Regulation and Metabolic Dependency of Zika Virus
Replication: Inhibition by Nrf2-Antioxidant Response and NAD(H) Antimetabolites.
J Virol. 2023 Feb 28;97(2):e0136322. doi: 10.1128/jvi.01363-22. Epub 2023 Jan
23. PMID: 36688653; PMCID: PMC9972919.
42: Rasquinha MT, Lasrado N, Sur M, Mone K, Qiu H, Riethoven JJ, Sobel RA, Reddy
J. A Monovalent Mt10-CVB3 Vaccine Prevents CVB4-Accelerated Type 1 Diabetes in
NOD Mice. Vaccines (Basel). 2022 Dec 29;11(1):76. doi: 10.3390/vaccines11010076.
PMID: 36679922; PMCID: PMC9864234.
43: Thompson M, Ulu A, Mukherjee M, Yuil-Valdes AG, Thoene M, Van Ormer M,
Slotkowski R, Mauch T, Anderson-Berry A, Hanson CK, Nordgren TM, Natarajan SK.
Something Smells Fishy: How Lipid Mediators Impact the Maternal-Fetal Interface
and Neonatal Development. Biomedicines. 2023 Jan 10;11(1):171. doi:
10.3390/biomedicines11010171. PMID: 36672679; PMCID: PMC9855822.
44: Dhakal J, Vu H, Chaudhari J, Nguyen K, Chaves BD. Method validation for the
recovery of the porcine respiratory and reproductive syndrome virus, a potential
SARS-CoV-2 surrogate, from stainless steel. Lett Appl Microbiol. 2023 Feb
16;76(2):ovac068. doi: 10.1093/lambio/ovac068. PMID: 36660929.
2024
1: Gomaa AE, El Mounadi K, Parperides E, Garcia-Ruiz H. Cell Fractionation and
the Identification of Host Proteins Involved in Plant-Virus Interactions.
Pathogens. 2024 Jan 5;13(1):53. doi: 10.3390/pathogens13010053. PMID: 38251360;
PMCID: PMC10819628.
2: Kwon T, Artiaga BL, McDowell CD, Whitworth KM, Wells KD, Prather RS, Delhon
G, Cigan M, White SN, Retallick J, Gaudreault NN, Morozov I, Richt JA. Gene
editing of pigs to control influenza A virus infections. bioRxiv [Preprint].
2024 Jan 16:2024.01.15.575771. doi: 10.1101/2024.01.15.575771. Update in: Emerg
Microbes Infect. 2024 Dec;13(1):2387449. doi: 10.1080/22221751.2024.2387449.
PMID: 38293027; PMCID: PMC10827075.
3: Yao Q, Jia Y, Ma P. cellMarkerPipe: Cell Marker Identification and Evaluation
Pipeline in Single Cell Transcriptomes. Res Sq [Preprint]. 2024 Jan
17:rs.3.rs-3844718. doi: 10.21203/rs.3.rs-3844718/v1. Update in: Sci Rep. 2024
Jun 7;14(1):13151. doi: 10.1038/s41598-024-63492-z. PMID: 38313296; PMCID:
PMC10836098.
4: Petro-Turnquist E, Corder Kampfe B, Gadeken A, Pekarek MJ, Weaver EA.
Multivalent Epigraph Hemagglutinin Vaccine Protects against Influenza B Virus in
Mice. Pathogens. 2024 Jan 23;13(2):97. doi: 10.3390/pathogens13020097. PMID:
38392835; PMCID: PMC10892733.
5: Sur M, Rasquinha MT, Mone K, Massilamany C, Lasrado N, Gurumurthy C, Sobel
RA, Reddy J. Investigation into Cardiac Myhc-α 334-352-Specific TCR Transgenic
Mice Reveals a Role for Cytotoxic CD4 T Cells in the Development of Cardiac
Autoimmunity. Cells. 2024 Jan 26;13(3):234. doi: 10.3390/cells13030234. PMID:
38334626; PMCID: PMC10854502.
6: Neujahr AC, Loy DS, Loy JD, Brodersen BW, Fernando SC. Rapid detection of
high consequence and emerging viral pathogens in pigs. Front Vet Sci. 2024 Feb
7;11:1341783. doi: 10.3389/fvets.2024.1341783. PMID: 38384961; PMCID:
PMC10879307.
7: Rasquinha MT, Mone K, Sur M, Lasrado N, Massilamany C, Kachman SD, Steffen D,
Reddy J. Mt10 Vaccine Protects Diversity Outbred Mice from CVB3 Infection by
Producing Virus-Specific Neutralizing Antibodies and Diverse Antibody Isotypes.
Vaccines (Basel). 2024 Mar 4;12(3):266. doi: 10.3390/vaccines12030266. PMID:
38543901; PMCID: PMC10975958.
8: Vu HLX, McVey DS. Recent progress on gene-deleted live-attenuated African
swine fever virus vaccines. NPJ Vaccines. 2024 Mar 13;9(1):60. doi:
10.1038/s41541-024-00845-9. PMID: 38480758; PMCID: PMC10937926.
9: Lohani SC, Ramer-Tait AE, Li Q. High-fat diet feeding exacerbates HIV-1
rectal transmission. mSystems. 2024 Mar 19;9(3):e0132223. doi:
10.1128/msystems.01322-23. Epub 2024 Feb 2. PMID: 38303112; PMCID: PMC10949459.
10: Hurst JP, Sato S, Ferris T, Yobi A, Zhou Y, Angelovici R, Clemente TE,
Holding DR. Editing the 19 kDa alpha-zein gene family generates non-
opaque2-based quality protein maize. Plant Biotechnol J. 2024 Apr;22(4):946-959.
doi: 10.1111/pbi.14237. Epub 2023 Nov 21. PMID: 37988568; PMCID: PMC10955486.
11: Petro-Turnquist E, Pekarek MJ, Weaver EA. Swine influenza A virus:
challenges and novel vaccine strategies. Front Cell Infect Microbiol. 2024 Apr
3;14:1336013. doi: 10.3389/fcimb.2024.1336013. PMID: 38633745; PMCID:
PMC11021629.
12: Lai DC, Chaudhari J, Vu HLX. African swine fever virus early protein pI73R
suppresses the type-I IFN promoter activities. Virus Res. 2024 May;343:199342.
doi: 10.1016/j.virusres.2024.199342. Epub 2024 Mar 1. PMID: 38408646; PMCID:
PMC10918272.
13: Reith RR, Batt MC, Fuller AM, Meekins JM, Diehl KA, Zhou Y, Bedwell PS, Ward
JA, Sanders SK, Petersen JL, Steffen DJ. A recessive <i>CLN3</i> variant is
responsible for delayed-onset retinal degeneration in Hereford cattle. J Vet
Diagn Invest. 2024 May;36(3):438-446. doi: 10.1177/10406387241239918. Epub 2024
Mar 22. PMID: 38516801; PMCID: PMC11110775.
14: Jia Y, Ma P, Yao Q. CellMarkerPipe: cell marker identification and
evaluation pipeline in single cell transcriptomes. Sci Rep. 2024 Jun
7;14(1):13151. doi: 10.1038/s41598-024-63492-z. PMID: 38849445; PMCID:
PMC11161599.
15: Pandey KK, Sahoo BR, Pattnaik AK. Protein Nanoparticles as Vaccine Platforms
for Human and Zoonotic Viruses. Viruses. 2024 Jun 9;16(6):936. doi:
10.3390/v16060936. PMID: 38932228; PMCID: PMC11209504.
16: Wang J, Cheng Z, Yao Q, Liu L, Xu D, Hu G. Bioinformatics and biomedical
informatics with ChatGPT: Year one review. ArXiv [Preprint]. 2024 Jun
12:arXiv:2403.15274v2. Update in: Quant Biol. 2024 Dec;12(4):345-359. doi:
10.1002/qub2.67. PMID: 38562449; PMCID: PMC10984005.
17: Ribeiro FA, Lau SK, Furbeck RA, Herrera NJ, Henriott ML, Bland NA, Fernando
SC, Subbiah J, Pflanzer SB, Dinh TT, Miller RK, Sullivan GA, Calkins CR. Effects
of relative humidity on dry-aged beef quality. Meat Sci. 2024 Jul;213:109498.
doi: 10.1016/j.meatsci.2024.109498. Epub 2024 Mar 18. PMID: 38520828.
18: Vu HD, Luong HQ, Lai HTL, Nguyen HT, Pham TH, Truong LQ, Nguyen GV, Vu HLX.
Evaluation of the diagnostic sensitivity and specificity of two pen-side tests
for detecting African swine fever virus in experimentally infected pigs. Arch
Virol. 2024 Jul 30;169(8):170. doi: 10.1007/s00705-024-06098-0. PMID: 39080100;
PMCID: PMC11289199.
19: Zhang L. From imprecise "immune debt" to nuanced "immune shortage"? Infect
Dis Now. 2024 Aug;54(5):104894. doi: 10.1016/j.idnow.2024.104894. Epub 2024 Mar
27. PMID: 38548017.
20: Cheng X, Baki VB, Moran M, Liu B, Yu J, Zhao M, Li Q, Riethoven JJ,
Gurumurth CB, Harris EN, Sun X. Liver matrin-3 protects mice against hepatic
steatosis and stress response via constitutive androstane receptor. Mol Metab.
2024 Aug;86:101977. doi: 10.1016/j.molmet.2024.101977. Epub 2024 Jun 25. PMID:
38936659; PMCID: PMC11267048.
21: Marquis A, Hubing V, Ziemann C, Moriyama EN, Zhang L. The primate-specific
presence of interferon regulatory factor-5 pseudogene 1. J Med Virol. 2024
Aug;96(8):e29879. doi: 10.1002/jmv.29879. PMID: 39169736.
22: Liu B, Nguyen PL, Yu H, Li X, Wang H, Nguyen TGB, Sahoo PK, Sur M, Reddy J,
Sillman S, Kachman SD, Altartouri B, Lu G, Natarajan SK, Pattabiraman M, Yu J.
Honey vesicle-like nanoparticles protect aged liver from non-alcoholic
steatohepatitis. Acta Pharm Sin B. 2024 Aug;14(8):3661-3679. doi:
10.1016/j.apsb.2024.05.002. Epub 2024 May 10. PMID: 39220874; PMCID:
PMC11365403.
23: Cervantes-Pérez SA, Zogli P, Amini S, Thibivilliers S, Tennant S, Hossain
MS, Xu H, Meyer I, Nooka A, Ma P, Yao Q, Naldrett MJ, Farmer A, Martin O,
Bhattacharya S, Kläver J, Libault M. Single-cell transcriptome atlases of
soybean root and mature nodule reveal new regulatory programs that control the
nodulation process. Plant Commun. 2024 Aug 12;5(8):100984. doi:
10.1016/j.xplc.2024.100984. Epub 2024 Jun 6. PMID: 38845198; PMCID: PMC11369782.
24: Petro-Turnquist E, Madapong A, Steffen D, Weaver EA. Immunogenicity and
Protective Efficacy of Dose-Sparing Epigraph Vaccine against H3 Swine Influenza
A Virus. Vaccines (Basel). 2024 Aug 22;12(8):943. doi: 10.3390/vaccines12080943.
PMID: 39204066; PMCID: PMC11359338.
25: Chiou KS, Feiger JA, Snyder RL, Davila CA, Gocci Carrasco N, Bennett SJ,
Dombrowski K, Fernando S, Major AM, Valentín-Acevedo A, West JT, Wood C.
Cognitive Intraindividual variability in injection drug use among Hispanic
residents of Puerto Rico. Appl Neuropsychol Adult. 2024 Aug 24:1-8. doi:
10.1080/23279095.2024.2389564. Epub ahead of print. PMID: 39180514; PMCID:
PMC11847948.
26: Nguyen TN, Lai DC, Sillman S, Petro-Turnquist E, Weaver EA, Vu HLX. Lipid
nanoparticle-encapsulated DNA vaccine confers protection against swine and
human-origin H1N1 influenza viruses. mSphere. 2024 Aug 28;9(8):e0028324. doi:
10.1128/msphere.00283-24. Epub 2024 Aug 1. PMID: 39087764; PMCID: PMC11351038.
27: Pekarek MJ, Weaver EA. Influenza B Virus Vaccine Innovation through
Computational Design. Pathogens. 2024 Sep 2;13(9):755. doi:
10.3390/pathogens13090755. PMID: 39338946; PMCID: PMC11434669.
28: Bohannon DG, Zablocki-Thomas LD, Leung ES, Dupont JK, Hattler JB, Kowalewska
J, Zhao M, Luo J, Salemi M, Amedee AM, Li Q, Kuroda MJ, Kim WK. CSF1R inhibition
depletes brain macrophages and reduces brain virus burden in SIV-infected
macaques. Brain. 2024 Sep 3;147(9):3059-3069. doi: 10.1093/brain/awae153. PMID:
39049445; PMCID: PMC11370798.
29: Laha E, Jena D, Biswas VK, Singh S, Raghav SK, Pattnaik AK, Chattopadhyay S.
Complete genome sequence of an Indian outbreak strain of chikungunya virus.
Microbiol Resour Announc. 2024 Sep 10;13(9):e0032624. doi: 10.1128/mra.00326-24.
Epub 2024 Jul 31. PMID: 39083697; PMCID: PMC11385740.
30: Madapong A, Petro-Turnquist EM, Webby RJ, McCormick AA, Weaver EA. Immunity
and Protective Efficacy of a Plant-Based Tobacco Mosaic Virus-like Nanoparticle
Vaccine against Influenza a Virus in Mice. Vaccines (Basel). 2024 Sep
26;12(10):1100. doi: 10.3390/vaccines12101100. PMID: 39460267; PMCID:
PMC11510914.
31: Wiggins J, Karim SU, Liu B, Li X, Zhou Y, Bai F, Yu J, Xiang SH.
Identification of a Novel Antiviral Lectin against SARS-CoV-2 Omicron Variant
from Shiitake-Mushroom-Derived Vesicle-like Nanoparticles. Viruses. 2024 Sep
30;16(10):1546. doi: 10.3390/v16101546. PMID: 39459880; PMCID: PMC11512411.
32: He C, Lv X, Liu J, Ruan J, Chen P, Huang C, Angeletti PC, Hua G, Moness ML,
Shi D, Dhar A, Yang S, Murphy S, Montoute I, Chen X, Islam KN, George S, Ince
TA, Drapkin R, Guda C, Davis JS, Wang C. HPV-YAP1 oncogenic alliance drives
malignant transformation of fallopian tube epithelial cells. EMBO Rep. 2024
Oct;25(10):4542-4569. doi: 10.1038/s44319-024-00233-3. Epub 2024 Sep 13. PMID:
39271776; PMCID: PMC11467260.
33: Zhang L. Exploring pathogen population density as a metric for understanding
post-COVID infectious disease surges. Front Immunol. 2024 Oct 3;15:1459628. doi:
10.3389/fimmu.2024.1459628. PMID: 39421748; PMCID: PMC11484442.
34: Zhu B, Li H, Lu B, Guo X, Wu C, Wang F, Li Q, Xie L, Glaser S, Francis H,
Alpini G, Wu C. Corrigendum to "Indole supplementation ameliorates MCD-induced
NASH in mice" [J Nutrit Biochem 2022;107:109041]. J Nutr Biochem. 2024
Nov;133:109705. doi: 10.1016/j.jnutbio.2024.109705. Epub 2024 Aug 5. Erratum
for: J Nutr Biochem. 2022 Sep;107:109041. doi: 10.1016/j.jnutbio.2022.109041.
PMID: 39106564.
35: Alex BG, Zhang ZY, Lasky D, Garcia-Ruiz H, Dewberry R, Allen C, Halterman D,
Rakotondrafara AM. A single phosphorylatable amino acid residue is essential
for the recognition of multiple potyviral HCPro effectors by potato
Ny<sub>tbr</sub>. Mol Plant Pathol. 2024 Nov;25(11):e70027. doi:
10.1111/mpp.70027. PMID: 39508202; PMCID: PMC11541239.
36: Carvalho JVRP, Carlson RM, Ghosh J, Queiroz VF, de Oliveira EG, Botelho BB,
Filho CAC, Agarkova IV, McClung OW, Van Etten JL, Dunigan DD, Rodrigues RAL.
Genomics and evolutionary analysis of <i>Chlorella variabilis-</i>infecting
viruses demarcate criteria for defining species of giant viruses. J Virol. 2024
Nov 19;98(11):e0036124. doi: 10.1128/jvi.00361-24. Epub 2024 Oct 15. PMID:
39404263; PMCID: PMC11575271.
37: Aluthge N, Adams S, Davila CA, Gocchi Carrasco NR, Chiou KS, Abadie R,
Bennett SJ, Dombrowski K, Major AM, Valentín-Acevedo A, West JT, Wood C,
Fernando SC. Gut microbiota profiling in injection drug users with and without
HIV-1 infection in Puerto Rico. Front Microbiol. 2024 Nov 26;15:1470037. doi:
10.3389/fmicb.2024.1470037. PMID: 39697649; PMCID: PMC11652967.
38: Mandal S, Ghosh JS, Lohani SC, Zhao M, Cheng Y, Burrack R, Luo M, Li Q. A
long-term stable cold-chain-friendly HIV mRNA vaccine encoding multi-epitope
viral protease cleavage site immunogens inducing immunogen-specific protective T
cell immunity. Emerg Microbes Infect. 2024 Dec;13(1):2377606. doi:
10.1080/22221751.2024.2377606. Epub 2024 Jul 18. PMID: 38979723; PMCID:
PMC11259082.
39: Kwon T, Artiaga BL, McDowell CD, Whitworth KM, Wells KD, Prather RS, Delhon
G, Cigan M, White SN, Retallick J, Gaudreault NN, Morozov I, Richt JA. Gene
editing of pigs to control influenza A virus infections. Emerg Microbes Infect.
2024 Dec;13(1):2387449. doi: 10.1080/22221751.2024.2387449. Epub 2024 Aug 24.
PMID: 39083026; PMCID: PMC11346336.
40: Wang J, Cheng Z, Yao Q, Liu L, Xu D, Hu G. Bioinformatics and biomedical
informatics with ChatGPT: Year one review. Quant Biol. 2024 Dec;12(4):345-359.
doi: 10.1002/qub2.67. Epub 2024 Jun 27. PMID: 39364207; PMCID: PMC11446534.
41: Watson SC, Neujahr AC, Chaves BD, Fernando SC, Sullivan GA. Environmental
Monitoring of Nebraska Ready-to-eat Meat Processing Establishments Resulted in
the Isolation of Listeria Alongside Pseudomonas Highly Resistant to Quaternary
Ammonia Sanitizer. J Food Prot. 2024 Dec;87(12):100391. doi:
10.1016/j.jfp.2024.100391. Epub 2024 Oct 28. PMID: 39490688.
42: Laugieri ME, Speciale I, Gimeno A, Lin S, Byers BW, Poveda A, Núñez-Franco
R, Iturrioz I, Moure MJ, Jiménez-Osés G, Russo-Krauss I, Notaro A, Van Etten JL,
Lowary TL, Jimenez-Barbero J, De Castro C, Tonetti M, Rojas AL. Unveiling the
GT114 family: Structural characterization of A075L, a glycosyltransferase from
Paramecium bursaria chlorella virus-1 (PBCV-1). Protein Sci. 2024
Dec;33(12):e5196. doi: 10.1002/pro.5196. PMID: 39555664; PMCID: PMC11571054.
43: Durazo-Martinez K, Chaudhari J, Kumari S, Vu HLX. Porcine peritoneal
macrophages are susceptible to porcine reproductive and respiratory syndrome
virus infection. Front Microbiol. 2024 Dec 11;15:1505900. doi:
10.3389/fmicb.2024.1505900. PMID: 39723134; PMCID: PMC11668767.
44: Speciale I, Notaro A, Bruijns S, van Kooyk Y, Esmael A, Molinaro A,
Balzarini F, Rodriguez E, Petro TM, Agarkova IV, Pattee GL, Van Etten JL, De
Castro C, Chiodo F. Carbohydrate-mediated interactions between chloroviruses and
the immune system. Commun Biol. 2024 Dec 19;7(1):1670. doi:
10.1038/s42003-024-07244-9. PMID: 39702824; PMCID: PMC11659582.