A word cloud of NCV research publication topics in the last 5 years (January 1, 2019 - September 5, 2024).
Recent Publications by NCV members
2024
1: Chaudhari J, Lai DC, Vu HLX. African swine fever viral proteins that inhibit
cGAS-STING pathway and type-I interferon production. Virology. 2024 Nov
26;602:110317. doi: 10.1016/j.virol.2024.110317. Epub ahead of print. PMID:
39616703.
2: Laugieri ME, Speciale I, Gimeno A, Lin S, Byers BW, Poveda A, Núñez-Franco R,
Iturrioz I, Moure MJ, Jiménez-Osés G, Russo-Krauss I, Notaro A, Van Etten JL,
Lowary TL, Jimenez-Barbero J, De Castro C, Tonetti M, Rojas AL. Unveiling the
GT114 family: Structural characterization of A075L, a glycosyltransferase from
Paramecium bursaria chlorella virus-1 (PBCV-1). Protein Sci. 2024
Dec;33(12):e5196. doi: 10.1002/pro.5196. PMID: 39555664; PMCID: PMC11571054.
3: Alex BG, Zhang ZY, Lasky D, Garcia-Ruiz H, Dewberry R, Allen C, Halterman D,
Rakotondrafara AM. A single phosphorylatable amino acid residue is essential
for the recognition of multiple potyviral HCPro effectors by potato
Ny<sub>tbr</sub>. Mol Plant Pathol. 2024 Nov;25(11):e70027. doi:
10.1111/mpp.70027. PMID: 39508202; PMCID: PMC11541239.
4: Watson SC, Neujahr AC, Chaves BD, Fernando SC, Sullivan GA. Environmental
Monitoring of Nebraska Ready-to-eat Meat Processing Establishments Resulted in
the Isolation of Listeria Alongside Pseudomonas Highly Resistant to Quaternary
Ammonia Sanitizer. J Food Prot. 2024 Dec;87(12):100391. doi:
10.1016/j.jfp.2024.100391. Epub 2024 Oct 28. PMID: 39490688.
5: Madapong A, Petro-Turnquist EM, Webby RJ, McCormick AA, Weaver EA. Immunity
and Protective Efficacy of a Plant-Based Tobacco Mosaic Virus-like Nanoparticle
Vaccine against Influenza a Virus in Mice. Vaccines (Basel). 2024 Sep
26;12(10):1100. doi: 10.3390/vaccines12101100. PMID: 39460267; PMCID:
PMC11510914.
6: Wiggins J, Karim SU, Liu B, Li X, Zhou Y, Bai F, Yu J, Xiang SH.
Identification of a Novel Antiviral Lectin against SARS-CoV-2 Omicron Variant
from Shiitake-Mushroom-Derived Vesicle-like Nanoparticles. Viruses. 2024 Sep
30;16(10):1546. doi: 10.3390/v16101546. PMID: 39459880; PMCID: PMC11512411.
7: Krishnamurthy R, Krishnamoorthy C, Dietsch AM, Natarajan SK. Molecular
biomarkers of dysphagia targeted exercise induced neuroplasticity: A review of
mechanistic processes and preliminary data on detraining effects. Brain Res.
2025 Jan 1;1846:149287. doi: 10.1016/j.brainres.2024.149287. Epub 2024 Oct 20.
PMID: 39437875.
8: Zhang L. Exploring pathogen population density as a metric for understanding
post-COVID infectious disease surges. Front Immunol. 2024 Oct 3;15:1459628. doi:
10.3389/fimmu.2024.1459628. PMID: 39421748; PMCID: PMC11484442.
9: Carvalho JVRP, Carlson RM, Ghosh J, Queiroz VF, de Oliveira EG, Botelho BB,
Filho CAC, Agarkova IV, McClung OW, Van Etten JL, Dunigan DD, Rodrigues RAL.
Genomics and evolutionary analysis of <i>Chlorella variabilis-</i>infecting
viruses demarcate criteria for defining species of giant viruses. J Virol. 2024
Nov 19;98(11):e0036124. doi: 10.1128/jvi.00361-24. Epub 2024 Oct 15. PMID:
39404263; PMCID: PMC11575271.
10: Sahoo PK, Ravi A, Liu B, Yu J, Natarajan SK. Palmitoleate protects against
lipopolysaccharide-induced inflammation and inflammasome activity. J Lipid Res.
2024 Nov;65(11):100672. doi: 10.1016/j.jlr.2024.100672. Epub 2024 Oct 11. PMID:
39396700; PMCID: PMC11585775.
11: Wang J, Cheng Z, Yao Q, Liu L, Xu D, Hu G. Bioinformatics and biomedical
informatics with ChatGPT: Year one review. Quant Biol. 2024 Dec;12(4):345-359.
doi: 10.1002/qub2.67. Epub 2024 Jun 27. PMID: 39364207; PMCID: PMC11446534.
12: Pekarek MJ, Weaver EA. Influenza B Virus Vaccine Innovation through
Computational Design. Pathogens. 2024 Sep 2;13(9):755. doi:
10.3390/pathogens13090755. PMID: 39338946; PMCID: PMC11434669.
13: Guo X, Li H, Zhu B, Wang X, Xu Q, Aquino E, Koo M, Li Q, Cai J, Glaser S, Wu
C. HFD feeding for seven months abolishes STING disruption-driven but not female
sex-based protection against hepatic steatosis and inflammation in mice. J Nutr
Biochem. 2025 Jan;135:109770. doi: 10.1016/j.jnutbio.2024.109770. Epub 2024 Sep
14. PMID: 39284534; PMCID: PMC11620956.
14: He C, Lv X, Liu J, Ruan J, Chen P, Huang C, Angeletti PC, Hua G, Moness ML,
Shi D, Dhar A, Yang S, Murphy S, Montoute I, Chen X, Islam KN, George S, Ince
TA, Drapkin R, Guda C, Davis JS, Wang C. HPV-YAP1 oncogenic alliance drives
malignant transformation of fallopian tube epithelial cells. EMBO Rep. 2024
Oct;25(10):4542-4569. doi: 10.1038/s44319-024-00233-3. Epub 2024 Sep 13. PMID:
39271776; PMCID: PMC11467260.
15: Liu B, Nguyen PL, Yu H, Li X, Wang H, Nguyen TGB, Sahoo PK, Sur M, Reddy J,
Sillman S, Kachman SD, Altartouri B, Lu G, Natarajan SK, Pattabiraman M, Yu J.
Honey vesicle-like nanoparticles protect aged liver from non-alcoholic
steatohepatitis. Acta Pharm Sin B. 2024 Aug;14(8):3661-3679. doi:
10.1016/j.apsb.2024.05.002. Epub 2024 May 10. PMID: 39220874; PMCID:
PMC11365403.
16: Petro-Turnquist E, Madapong A, Steffen D, Weaver EA. Immunogenicity and
Protective Efficacy of Dose-Sparing Epigraph Vaccine against H3 Swine Influenza
A Virus. Vaccines (Basel). 2024 Aug 22;12(8):943. doi: 10.3390/vaccines12080943.
PMID: 39204066; PMCID: PMC11359338.
17: Chiou KS, Feiger JA, Snyder RL, Davila CA, Gocci Carrasco N, Bennett SJ,
Dombrowski K, Fernando S, Major AM, Valentín-Acevedo A, West JT, Wood C.
Cognitive Intraindividual variability in injection drug use among Hispanic
residents of Puerto Rico. Appl Neuropsychol Adult. 2024 Aug 24:1-8. doi:
10.1080/23279095.2024.2389564. Epub ahead of print. PMID: 39180514.
18: Marquis A, Hubing V, Ziemann C, Moriyama EN, Zhang L. The primate-specific
presence of interferon regulatory factor-5 pseudogene 1. J Med Virol. 2024
Aug;96(8):e29879. doi: 10.1002/jmv.29879. PMID: 39169736.
19: Zhu B, Li H, Lu B, Guo X, Wu C, Wang F, Li Q, Xie L, Glaser S, Francis H,
Alpini G, Wu C. Corrigendum to "Indole supplementation ameliorates MCD-induced
NASH in mice" [J Nutrit Biochem 2022;107:109041]. J Nutr Biochem. 2024
Nov;133:109705. doi: 10.1016/j.jnutbio.2024.109705. Epub 2024 Aug 5. Erratum
for: J Nutr Biochem. 2022 Sep;107:109041. doi: 10.1016/j.jnutbio.2022.109041.
PMID: 39106564.
20: Nguyen TN, Lai DC, Sillman S, Petro-Turnquist E, Weaver EA, Vu HLX. Lipid
nanoparticle-encapsulated DNA vaccine confers protection against swine and
human-origin H1N1 influenza viruses. mSphere. 2024 Aug 28;9(8):e0028324. doi:
10.1128/msphere.00283-24. Epub 2024 Aug 1. PMID: 39087764; PMCID: PMC11351038.
21: Laha E, Jena D, Biswas VK, Singh S, Raghav SK, Pattnaik AK, Chattopadhyay S.
Complete genome sequence of an Indian outbreak strain of chikungunya virus.
Microbiol Resour Announc. 2024 Sep 10;13(9):e0032624. doi: 10.1128/mra.00326-24.
Epub 2024 Jul 31. PMID: 39083697; PMCID: PMC11385740.
22: Kwon T, Artiaga BL, McDowell CD, Whitworth KM, Wells KD, Prather RS, Delhon
G, Cigan M, White SN, Retallick J, Gaudreault NN, Morozov I, Richt JA. Gene
editing of pigs to control influenza A virus infections. Emerg Microbes Infect.
2024 Dec;13(1):2387449. doi: 10.1080/22221751.2024.2387449. Epub 2024 Aug 24.
PMID: 39083026; PMCID: PMC11346336.
23: Vu HD, Luong HQ, Lai HTL, Nguyen HT, Pham TH, Truong LQ, Nguyen GV, Vu HLX.
Evaluation of the diagnostic sensitivity and specificity of two pen-side tests
for detecting African swine fever virus in experimentally infected pigs. Arch
Virol. 2024 Jul 30;169(8):170. doi: 10.1007/s00705-024-06098-0. PMID: 39080100;
PMCID: PMC11289199.
24: Bohannon DG, Zablocki-Thomas LD, Leung ES, Dupont JK, Hattler JB, Kowalewska
J, Zhao M, Luo J, Salemi M, Amedee AM, Li Q, Kuroda MJ, Kim WK. CSF1R inhibition
depletes brain macrophages and reduces brain virus burden in SIV-infected
macaques. Brain. 2024 Sep 3;147(9):3059-3069. doi: 10.1093/brain/awae153. PMID:
39049445; PMCID: PMC11370798.
25: Mandal S, Ghosh JS, Lohani SC, Zhao M, Cheng Y, Burrack R, Luo M, Li Q. A
long-term stable cold-chain-friendly HIV mRNA vaccine encoding multi-epitope
viral protease cleavage site immunogens inducing immunogen-specific protective T
cell immunity. Emerg Microbes Infect. 2024 Dec;13(1):2377606. doi:
10.1080/22221751.2024.2377606. Epub 2024 Jul 18. PMID: 38979723; PMCID:
PMC11259082.
26: Cheng X, Baki VB, Moran M, Liu B, Yu J, Zhao M, Li Q, Riethoven JJ,
Gurumurth CB, Harris EN, Sun X. Liver matrin-3 protects mice against hepatic
steatosis and stress response via constitutive androstane receptor. Mol Metab.
2024 Aug;86:101977. doi: 10.1016/j.molmet.2024.101977. Epub 2024 Jun 25. PMID:
38936659; PMCID: PMC11267048.
27: Pandey KK, Sahoo BR, Pattnaik AK. Protein Nanoparticles as Vaccine Platforms
for Human and Zoonotic Viruses. Viruses. 2024 Jun 9;16(6):936. doi:
10.3390/v16060936. PMID: 38932228; PMCID: PMC11209504.
28: Jia Y, Ma P, Yao Q. CellMarkerPipe: cell marker identification and
evaluation pipeline in single cell transcriptomes. Sci Rep. 2024 Jun
7;14(1):13151. doi: 10.1038/s41598-024-63492-z. PMID: 38849445; PMCID:
PMC11161599.
29: Cervantes-Pérez SA, Zogli P, Amini S, Thibivilliers S, Tennant S, Hossain
MS, Xu H, Meyer I, Nooka A, Ma P, Yao Q, Naldrett MJ, Farmer A, Martin O,
Bhattacharya S, Kläver J, Libault M. Single-cell transcriptome atlases of
soybean root and mature nodule reveal new regulatory programs that control the
nodulation process. Plant Commun. 2024 Aug 12;5(8):100984. doi:
10.1016/j.xplc.2024.100984. Epub 2024 Jun 6. PMID: 38845198; PMCID: PMC11369782.
30: Barman M, Davis TW, Hein GL, Tatineni S, Mondal S. First report of Triticum
mosaic virus infecting oat crop in the United States. Plant Dis. 2024 Jun 5.
doi: 10.1094/PDIS-04-24-0754-PDN. Epub ahead of print. PMID: 38840488.
31: Starr K, Montesanto F, Perisho E, Aluthge N, Pegg M, Fernando SC. Gut
Microbial Composition of Cyprinella lutrensis (Red Shiner) and Notropis
stramineus (Sand Shiner): Insights from Wild Fish Populations. Microb Ecol. 2024
May 22;87(1):75. doi: 10.1007/s00248-024-02386-z. PMID: 38775958; PMCID:
PMC11111511.
32: Petro-Turnquist E, Pekarek MJ, Weaver EA. Swine influenza A virus:
challenges and novel vaccine strategies. Front Cell Infect Microbiol. 2024 Apr
3;14:1336013. doi: 10.3389/fcimb.2024.1336013. PMID: 38633745; PMCID:
PMC11021629.
33: Szydło W, Wosula EN, Knoell E, Hein GL, Mondal S, Tatineni S. Helper
Component-Proteinase of Triticum Mosaic Virus Is a Viral Determinant of Wheat
Curl Mite Transmission. Phytopathology. 2024 Jul;114(7):1672-1679. doi:
10.1094/PHYTO-02-24-0073-R. Epub 2024 Jul 2. PMID: 38579745.
34: Wang J, Cheng Z, Yao Q, Liu L, Xu D, Hu G. Bioinformatics and biomedical
informatics with ChatGPT: Year one review. ArXiv [Preprint]. 2024 Jun
12:arXiv:2403.15274v2. Update in: Quant Biol. 2024 Dec;12(4):345-359. doi:
10.1002/qub2.67. PMID: 38562449; PMCID: PMC10984005.
35: Zhang L. From imprecise "immune debt" to nuanced "immune shortage"? Infect
Dis Now. 2024 Aug;54(5):104894. doi: 10.1016/j.idnow.2024.104894. Epub 2024 Mar
27. PMID: 38548017.
36: Rasquinha MT, Mone K, Sur M, Lasrado N, Massilamany C, Kachman SD, Steffen
D, Reddy J. Mt10 Vaccine Protects Diversity Outbred Mice from CVB3 Infection by
Producing Virus-Specific Neutralizing Antibodies and Diverse Antibody Isotypes.
Vaccines (Basel). 2024 Mar 4;12(3):266. doi: 10.3390/vaccines12030266. PMID:
38543901; PMCID: PMC10975958.
37: Ribeiro FA, Lau SK, Furbeck RA, Herrera NJ, Henriott ML, Bland NA, Fernando
SC, Subbiah J, Pflanzer SB, Dinh TT, Miller RK, Sullivan GA, Calkins CR. Effects
of relative humidity on dry-aged beef quality. Meat Sci. 2024 Jul;213:109498.
doi: 10.1016/j.meatsci.2024.109498. Epub 2024 Mar 18. PMID: 38520828.
38: Reith RR, Batt MC, Fuller AM, Meekins JM, Diehl KA, Zhou Y, Bedwell PS, Ward
JA, Sanders SK, Petersen JL, Steffen DJ. A recessive <i>CLN3</i> variant is
responsible for delayed-onset retinal degeneration in Hereford cattle. J Vet
Diagn Invest. 2024 May;36(3):438-446. doi: 10.1177/10406387241239918. Epub 2024
Mar 22. PMID: 38516801; PMCID: PMC11110775.
39: Vu HLX, McVey DS. Recent progress on gene-deleted live-attenuated African
swine fever virus vaccines. NPJ Vaccines. 2024 Mar 13;9(1):60. doi:
10.1038/s41541-024-00845-9. PMID: 38480758; PMCID: PMC10937926.
40: Slotkowski R, VanOrmer M, Akbar A, Hahka T, Thompson M, Rapoza R, Ulu A,
Thoene M, Lyden E, Mukherjee M, Yuil-Valdes A, Natarajan SK, Nordgren T, Hanson
C, Berry AA. Bioactive metabolites of OMEGA-6 and OMEGA-3 fatty acids are
associated with inflammatory cytokine concentrations in maternal and infant
plasma at the time of delivery. Clin Nutr ESPEN. 2024 Apr;60:223-233. doi:
10.1016/j.clnesp.2024.02.006. Epub 2024 Feb 7. PMID: 38479914.
41: Lai DC, Chaudhari J, Vu HLX. African swine fever virus early protein pI73R
suppresses the type-I IFN promoter activities. Virus Res. 2024 May;343:199342.
doi: 10.1016/j.virusres.2024.199342. Epub 2024 Mar 1. PMID: 38408646; PMCID:
PMC10918272.
42: Petro-Turnquist E, Corder Kampfe B, Gadeken A, Pekarek MJ, Weaver EA.
Multivalent Epigraph Hemagglutinin Vaccine Protects against Influenza B Virus in
Mice. Pathogens. 2024 Jan 23;13(2):97. doi: 10.3390/pathogens13020097. PMID:
38392835; PMCID: PMC10892733.
43: Neujahr AC, Loy DS, Loy JD, Brodersen BW, Fernando SC. Rapid detection of
high consequence and emerging viral pathogens in pigs. Front Vet Sci. 2024 Feb
7;11:1341783. doi: 10.3389/fvets.2024.1341783. PMID: 38384961; PMCID:
PMC10879307.
44: VanOrmer M, Thompson M, Thoene M, Riethoven JJ, Natarajan SK, Hanson C,
Anderson-Berry A. The impact of iron supplementation on the preterm neonatal gut
microbiome: A pilot study. PLoS One. 2024 Feb 21;19(2):e0297558. doi:
10.1371/journal.pone.0297558. PMID: 38381745; PMCID: PMC10880995.
45: Sur M, Rasquinha MT, Mone K, Massilamany C, Lasrado N, Gurumurthy C, Sobel
RA, Reddy J. Investigation into Cardiac Myhc-α 334-352-Specific TCR Transgenic
Mice Reveals a Role for Cytotoxic CD4 T Cells in the Development of Cardiac
Autoimmunity. Cells. 2024 Jan 26;13(3):234. doi: 10.3390/cells13030234. PMID:
38334626; PMCID: PMC10854502.
46: Yao Q, Jia Y, Ma P. cellMarkerPipe: Cell Marker Identification and
Evaluation Pipeline in Single Cell Transcriptomes. Res Sq [Preprint]. 2024 Jan
17:rs.3.rs-3844718. doi: 10.21203/rs.3.rs-3844718/v1. Update in: Sci Rep. 2024
Jun 7;14(1):13151. doi: 10.1038/s41598-024-63492-z. PMID: 38313296; PMCID:
PMC10836098.
47: Lohani SC, Ramer-Tait AE, Li Q. High-fat diet feeding exacerbates HIV-1
rectal transmission. mSystems. 2024 Mar 19;9(3):e0132223. doi:
10.1128/msystems.01322-23. Epub 2024 Feb 2. PMID: 38303112; PMCID: PMC10949459.
48: Kwon T, Artiaga BL, McDowell CD, Whitworth KM, Wells KD, Prather RS, Delhon
G, Cigan M, White SN, Retallick J, Gaudreault NN, Morozov I, Richt JA. Gene
editing of pigs to control influenza A virus infections. bioRxiv [Preprint].
2024 Jan 16:2024.01.15.575771. doi: 10.1101/2024.01.15.575771. Update in: Emerg
Microbes Infect. 2024 Dec;13(1):2387449. doi: 10.1080/22221751.2024.2387449.
PMID: 38293027; PMCID: PMC10827075.
49: Gomaa AE, El Mounadi K, Parperides E, Garcia-Ruiz H. Cell Fractionation and
the Identification of Host Proteins Involved in Plant-Virus Interactions.
Pathogens. 2024 Jan 5;13(1):53. doi: 10.3390/pathogens13010053. PMID: 38251360;
PMCID: PMC10819628.
50: Sahoo PK, Krishnamoorthy C, Wood JR, Hanson C, Anderson-Berry A, Mott JL,
Natarajan SK. Palmitate induces integrated stress response and lipoapoptosis in
trophoblasts. Cell Death Dis. 2024 Jan 11;15(1):31. doi:
10.1038/s41419-023-06415-6. PMID: 38212315; PMCID: PMC10784287.
2023
1: Kumari S, Chaudhari J, Huang Q, Gauger P, De Almeida MN, Ly H, Liang Y, Vu
HLX. Assessment of Immune Responses to a Trivalent Pichinde Virus-Vectored
Vaccine Expressing Hemagglutinin Genes from Three Co-Circulating Influenza A
Virus Subtypes in Pigs. Vaccines (Basel). 2023 Dec 2;11(12):1806. doi:
10.3390/vaccines11121806. PMID: 38140210; PMCID: PMC10748346.
2: Lievens EJP, Agarkova IV, Dunigan DD, Van Etten JL, Becks L. Efficient assays
to quantify the life history traits of algal viruses. Appl Environ Microbiol.
2023 Dec 21;89(12):e0165923. doi: 10.1128/aem.01659-23. Epub 2023 Nov 21. PMID:
38092674; PMCID: PMC10734466.
3: Solis-Leal A, Boby N, Mallick S, Cheng Y, Wu F, De La Torre G, Dufour J,
Alvarez X, Shivanna V, Liu Y, Fennessey CM, Lifson JD, Li Q, Keele BF, Ling B.
Lymphoid tissues contribute to plasma viral clonotypes early after
antiretroviral therapy interruption in SIV-infected rhesus macaques. Sci Transl
Med. 2023 Dec 13;15(726):eadi9867. doi: 10.1126/scitranslmed.adi9867. Epub 2023
Dec 13. PMID: 38091409; PMCID: PMC11244655.
4: Wiggins J, Nguyen N, Wei W, Wang LL, Hollingsead Olson H, Xiang SH. Lactic
acid bacterial surface display of scytovirin inhibitors for anti-ebolavirus
infection. Front Microbiol. 2023 Nov 23;14:1269869. doi:
10.3389/fmicb.2023.1269869. PMID: 38075878; PMCID: PMC10704896.
5: Walker LR, Vu HL, Montooth KL, Ciobanu DC. Functional and evolutionary
analysis of host Synaptogyrin-2 in porcine circovirus type 2 susceptibility.
PLoS Genet. 2023 Nov 27;19(11):e1011029. doi: 10.1371/journal.pgen.1011029.
PMID: 38011217; PMCID: PMC10703400.
6: Luong HQ, Lai HTL, Truong LQ, Nguyen TN, Vu HD, Nguyen HT, Nguyen LT, Pham
TH, McVey DS, Vu HLX. Comparative Analysis of Swine Antibody Responses following
Vaccination with Live-Attenuated and Killed African Swine Fever Virus Vaccines.
Vaccines (Basel). 2023 Nov 3;11(11):1687. doi: 10.3390/vaccines11111687. PMID:
38006019; PMCID: PMC10674706.
7: Hurst JP, Sato S, Ferris T, Yobi A, Zhou Y, Angelovici R, Clemente TE,
Holding DR. Editing the 19 kDa alpha-zein gene family generates non-
opaque2-based quality protein maize. Plant Biotechnol J. 2024 Apr;22(4):946-959.
doi: 10.1111/pbi.14237. Epub 2023 Nov 21. PMID: 37988568; PMCID: PMC10955486.
8: Delhon G, Khatiwada S, Doub D, Harris S, Chaulagain S, El-Gaffary M, Rock DL.
Bovine papular stomatitis virus as a vaccine vector for cattle. J Gen Virol.
2023 Nov;104(11):001914. doi: 10.1099/jgv.0.001914. PMID: 37976092; PMCID:
PMC10768693.
9: White KS, Walker JA, Wang J, Autissier P, Miller AD, Abuelezan NN, Burrack R,
Li Q, Kim WK, Williams KC. Simian immunodeficiency virus-infected rhesus
macaques with AIDS co-develop cardiovascular pathology and encephalitis. Front
Immunol. 2023 Oct 27;14:1240946. doi: 10.3389/fimmu.2023.1240946. PMID:
37965349; PMCID: PMC10641955.
10: Julius P, Kang G, Siyumbwa S, Musumali J, Tso FY, Ngalamika O, Kaile T,
Maate F, Moonga P, West JT, Angeletti P, Wood C. Co-infection and co-
localization of Kaposi sarcoma-associated herpesvirus and Epstein-Barr virus in
HIV-associated Kaposi sarcoma: a case report. Front Cell Infect Microbiol. 2023
Oct 20;13:1270935. doi: 10.3389/fcimb.2023.1270935. PMID: 37928187; PMCID:
PMC10623342.
11: McMahon-Cole H, Johnson A, Sadat Aghamiri S, Helikar T, Crawford LB.
Modeling and Remodeling the Cell: How Digital Twins and HCMV Can Elucidate the
Complex Interactions of Viral Latency, Epigenetic Regulation, and Immune
Responses. Curr Clin Microbiol Rep. 2023 Sep;10(3):141-151. doi:
10.1007/s40588-023-00201-w. Epub 2023 Jul 29. PMID: 37901689; PMCID:
PMC10601359.
12: Nguyen TN, Kumari S, Sillman S, Chaudhari J, Lai DC, Vu HLX. A Single-Dose
Intramuscular Immunization of Pigs with Lipid Nanoparticle DNA Vaccines Based on
the Hemagglutinin Antigen Confers Complete Protection against Challenge
Infection with the Homologous Influenza Virus Strain. Vaccines (Basel). 2023 Oct
15;11(10):1596. doi: 10.3390/vaccines11101596. PMID: 37896997; PMCID:
PMC10611089.
13: Pekarek MJ, Weaver EA. Existing Evidence for Influenza B Virus Adaptations
to Drive Replication in Humans as the Primary Host. Viruses. 2023 Sep
30;15(10):2032. doi: 10.3390/v15102032. PMID: 37896807; PMCID: PMC10612074.
14: Sur M, Rasquinha MT, Arumugam R, Massilamany C, Gangaplara A, Mone K,
Lasrado N, Yalaka B, Doiphode A, Gurumurthy C, Steffen D, Reddy J. Transgenic
Mice Expressing Functional TCRs Specific to Cardiac Myhc-α 334-352 on Both CD4
and CD8 T Cells Are Resistant to the Development of Myocarditis on C57BL/6
Genetic Background. Cells. 2023 Sep 25;12(19):2346. doi: 10.3390/cells12192346.
PMID: 37830560; PMCID: PMC10571761.
15: Keynia S, Jaafar L, Zhou Y, Anderson CT, Turner JA. Stomatal opening
efficiency is controlled by cell wall organization in <i>Arabidopsis
thaliana</i>. PNAS Nexus. 2023 Sep 11;2(9):pgad294. doi:
10.1093/pnasnexus/pgad294. PMID: 37731948; PMCID: PMC10508357.
16: Mone K, Reddy J. The knowns and unknowns of cardiac autoimmunity in viral
myocarditis. Rev Med Virol. 2023 Nov;33(6):e2478. doi: 10.1002/rmv.2478. Epub
2023 Sep 2. PMID: 37658748.
17: Ho HVN, Dunigan DD, Salsbery ME, Agarkova IV, Al Ameeli Z, Van Etten JL,
DeLong JP. Viral Chemotaxis of Paramecium Bursaria Altered by Algal
Endosymbionts. Microb Ecol. 2023 Nov;86(4):2904-2909. doi:
10.1007/s00248-023-02292-w. Epub 2023 Aug 31. PMID: 37650927.
18: Neltner TJ, Sahoo PK, Smith RW, Anders JPV, Arnett JE, Ortega DG, Schmidt
RJ, Johnson GO, Natarajan SK, Housh TJ. Effects of High-Intensity, Eccentric-
Only Muscle Actions on Serum Biomarkers of Collagen Degradation and Synthesis. J
Strength Cond Res. 2023 Sep 1;37(9):1729-1737. doi:
10.1519/JSC.0000000000004457. PMID: 37616533.
19: Engel AJ, Paech S, Langhans M, van Etten JL, Moroni A, Thiel G, Rauh O.
Combination of hydrophobicity and codon usage bias determines sorting of model
K<sup>+</sup> channel protein to either mitochondria or endoplasmic reticulum.
Traffic. 2023 Nov;24(11):533-545. doi: 10.1111/tra.12915. Epub 2023 Aug 14.
PMID: 37578147.
20: Jiang Y, Angeletti PC, Hoffman AJ. Investigating the Physiological
Mechanisms between Resistance Training and Pain Relief in the Cancer Population:
A Literature Review. J Cancer Ther. 2023 Feb;14(2):80-101. doi:
10.4236/jct.2023.142008. Epub 2023 Feb 28. PMID: 37502393; PMCID: PMC10373509.
21: Julius P, Siyumbwa SN, Maate F, Moonga P, Kang G, Kaile T, West JT, Wood C,
Angeletti PC. Yes-associated protein-1 overexpression in ocular surface squamous
neoplasia; a potential diagnostic marker and therapeutic target. Front Oncol.
2023 Jul 5;13:1213426. doi: 10.3389/fonc.2023.1213426. PMID: 37476371; PMCID:
PMC10354641.
22: Sexton NR, Cline PJ, Gallichotte EN, Fitzmeyer E, Young MC, Janich AJ,
Pabilonia KL, Ehrhart N, Ebel GD. SARS-CoV-2 entry into and evolution within a
skilled nursing facility. Sci Rep. 2023 Jul 19;13(1):11657. doi:
10.1038/s41598-023-38544-5. PMID: 37468595; PMCID: PMC10356950.
23: Parperides E, El Mounadi K, Garcia-Ruiz H. Induction and suppression of gene
silencing in plants by nonviral microbes. Mol Plant Pathol. 2023
Oct;24(10):1347-1356. doi: 10.1111/mpp.13362. Epub 2023 Jul 12. PMID: 37438989;
PMCID: PMC10502822.
24: Long NS, Hales KE, Berry ED, Legako JF, Woerner DR, Broadway PR, Carroll JA,
Burdick Sanchez NC, Fernando SC, Wells JE. Antibimicrobial Susceptibility of
Trimethoprim-Sulfamethoxazole and 3rd-Generation Cephalosporin-Resistant
<i>Escherichia coli</i> Isolates Enumerated Longitudinally from Feedlot Arrival
to Harvest in High-Risk Beef Cattle Administered Common Metaphylactic
Antimicrobials. Foodborne Pathog Dis. 2023 Jul;20(7):252-260. doi:
10.1089/fpd.2023.0001. Epub 2023 Jun 29. PMID: 37384919.
25: Esmael A, Agarkova IV, Dunigan DD, Zhou Y, Van Etten JL. Viral DNA
Accumulation Regulates Replication Efficiency of <i>Chlorovirus</i> OSy-NE5 in
Two Closely Related <i>Chlorella variabilis</i> Strains. Viruses. 2023 Jun
9;15(6):1341. doi: 10.3390/v15061341. PMID: 37376640; PMCID: PMC10302427.
26: Crawford LB. Hematopoietic stem cells and betaherpesvirus latency. Front
Cell Infect Microbiol. 2023 Jun 6;13:1189805. doi: 10.3389/fcimb.2023.1189805.
PMID: 37346032; PMCID: PMC10279960.
27: Zilbauer M, James KR, Kaur M, Pott S, Li Z, Burger A, Thiagarajah JR,
Burclaff J, Jahnsen FL, Perrone F, Ross AD, Matteoli G, Stakenborg N, Sujino T,
Moor A, Bartolome-Casado R, Bækkevold ES, Zhou R, Xie B, Lau KS, Din S, Magness
ST, Yao Q, Beyaz S, Arends M, Denadai-Souza A, Coburn LA, Gaublomme JT, Baldock
R, Papatheodorou I, Ordovas-Montanes J, Boeckxstaens G, Hupalowska A, Teichmann
SA, Regev A, Xavier RJ, Simmons A, Snyder MP, Wilson KT; Gut Cell Atlas
Consortium; Human Cell Atlas Gut Biological Network Consortium. A Roadmap for
the Human Gut Cell Atlas. Nat Rev Gastroenterol Hepatol. 2023 Sep;20(9):597-614.
doi: 10.1038/s41575-023-00784-1. Epub 2023 May 31. PMID: 37258747; PMCID:
PMC10527367.
28: Petro-Turnquist E, Pekarek M, Jeanjaquet N, Wooledge C, Steffen D, Vu H,
Weaver EA. Adenoviral-vectored epigraph vaccine elicits robust, durable, and
protective immunity against H3 influenza A virus in swine. Front Immunol. 2023
May 15;14:1143451. doi: 10.3389/fimmu.2023.1143451. PMID: 37256131; PMCID:
PMC10225514.
29: Eaton CW, Vu HL, Hodges AL, Harris SP, Kachman SD, Ciobanu DC. Host-genetic-
based outcome of co-infection by PCV2b and PRRSV in pigs. J Anim Sci. 2023 Jan
3;101:skad164. doi: 10.1093/jas/skad164. PMID: 37210473; PMCID: PMC10284038.
30: Sreenivasan CC, Liu R, Gao R, Guo Y, Hause BM, Thomas M, Naveed A, Clement
T, Rausch D, Christopher-Hennings J, Nelson E, Druce J, Zhao M, Kaushik RS, Li
Q, Sheng Z, Wang D, Li F. Influenza C and D Viruses Demonstrated a Differential
Respiratory Tissue Tropism in a Comparative Pathogenesis Study in Guinea Pigs. J
Virol. 2023 Jun 29;97(6):e0035623. doi: 10.1128/jvi.00356-23. Epub 2023 May 18.
PMID: 37199648; PMCID: PMC10308911.
31: DeLong JP, Van Etten JL, Dunigan DD. Lessons from Chloroviruses: the Complex
and Diverse Roles of Viruses in Food Webs. J Virol. 2023 May 31;97(5):e0027523.
doi: 10.1128/jvi.00275-23. Epub 2023 May 1. PMID: 37133447; PMCID: PMC10231191.
32: Dunigan DD, Agarkova IV, Esmael A, Alvarez S, Van Etten JL. Early-Phase
Drive to the Precursor Pool: Chloroviruses Dive into the Deep End of Nucleotide
Metabolism. Viruses. 2023 Mar 31;15(4):911. doi: 10.3390/v15040911. PMID:
37112891; PMCID: PMC10142491.
33: Pattnaik A, Sahoo BR, Struble LR, Borgstahl GEO, Zhou Y, Franco R, Barletta
RG, Osorio FA, Petro TM, Pattnaik AK. A Ferritin Nanoparticle-Based Zika Virus
Vaccine Candidate Induces Robust Humoral and Cellular Immune Responses and
Protects Mice from Lethal Virus Challenge. Vaccines (Basel). 2023 Apr
10;11(4):821. doi: 10.3390/vaccines11040821. PMID: 37112733; PMCID: PMC10143468.
34: Bennett SJ, Davila CA, Reyes Z, Valentín-Acevedo A, Gocchi Carrasco K,
Abadie R, Marlin MC, Beel M, Chapple AG, Fernando S, Guthridge JM, Chiou KS,
Dombrowski K, West JT, Wood C. Immune profiling in Puerto Rican injection drug
users with and without HIV-1 infection. J Leukoc Biol. 2023 Jul
27;114(2):142-153. doi: 10.1093/jleuko/qiad045. PMID: 37042743; PMCID:
PMC10776106.
35: Watson SC, Furbeck RA, Fernando SC, Chaves BD, Sullivan GA. Spoilage
Pseudomonas survive common thermal processing schedules and grow in emulsified
meat during extended vacuum storage. J Food Sci. 2023 May;88(5):2162-2167. doi:
10.1111/1750-3841.16557. Epub 2023 Apr 7. PMID: 37026560.
36: Graham EH, Tom WA, Neujahr AC, Adamowicz MS, Clarke JL, Herr JR, Fernando
SC. The persistence and stabilization of auxiliary genes in the human skin
virome. Virol J. 2023 Mar 22;20(1):49. doi: 10.1186/s12985-023-02012-3. PMID:
36949545; PMCID: PMC10031188.
37: Kittana H, Gomes-Neto JC, Heck K, Juritsch AF, Sughroue J, Xian Y, Mantz S,
Segura Muñoz RR, Cody LA, Schmaltz RJ, Anderson CL, Moxley RA, Hostetter JM,
Fernando SC, Clarke J, Kachman SD, Cressler CE, Benson AK, Walter J, Ramer-Tait
AE. Evidence for a Causal Role for Escherichia coli Strains Identified as
Adherent-Invasive (AIEC) in Intestinal Inflammation. mSphere. 2023 Apr
20;8(2):e0047822. doi: 10.1128/msphere.00478-22. Epub 2023 Mar 8. PMID:
36883813; PMCID: PMC10117065.
38: Mone K, Lasrado N, Sur M, Reddy J. Vaccines against Group B Coxsackieviruses
and Their Importance. Vaccines (Basel). 2023 Jan 27;11(2):274. doi:
10.3390/vaccines11020274. PMID: 36851152; PMCID: PMC9961666.
39: Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q. Displaying
and delivering viral membrane antigens via WW domain-activated extracellular
vesicles. Sci Adv. 2023 Jan 27;9(4):eade2708. doi: 10.1126/sciadv.ade2708. Epub
2023 Jan 27. PMID: 36706192; PMCID: PMC9882979.
40: Drury S, Claussen G, Zetterman A, Moriyama H, Moriyama EN, Zhang L.
Evolution and emergence of primate-specific interferon regulatory factor 9. J
Med Virol. 2023 Feb;95(2):e28521. doi: 10.1002/jmv.28521. PMID: 36691924; PMCID:
PMC10107944.
41: Sahoo BR, Crook AA, Pattnaik A, Torres-Gerena AD, Khalimonchuk O, Powers R,
Franco R, Pattnaik AK. Redox Regulation and Metabolic Dependency of Zika Virus
Replication: Inhibition by Nrf2-Antioxidant Response and NAD(H) Antimetabolites.
J Virol. 2023 Feb 28;97(2):e0136322. doi: 10.1128/jvi.01363-22. Epub 2023 Jan
23. PMID: 36688653; PMCID: PMC9972919.
42: Rasquinha MT, Lasrado N, Sur M, Mone K, Qiu H, Riethoven JJ, Sobel RA, Reddy
J. A Monovalent Mt10-CVB3 Vaccine Prevents CVB4-Accelerated Type 1 Diabetes in
NOD Mice. Vaccines (Basel). 2022 Dec 29;11(1):76. doi: 10.3390/vaccines11010076.
PMID: 36679922; PMCID: PMC9864234.
43: Thompson M, Ulu A, Mukherjee M, Yuil-Valdes AG, Thoene M, Van Ormer M,
Slotkowski R, Mauch T, Anderson-Berry A, Hanson CK, Nordgren TM, Natarajan SK.
Something Smells Fishy: How Lipid Mediators Impact the Maternal-Fetal Interface
and Neonatal Development. Biomedicines. 2023 Jan 10;11(1):171. doi:
10.3390/biomedicines11010171. PMID: 36672679; PMCID: PMC9855822.
44: Dhakal J, Vu H, Chaudhari J, Nguyen K, Chaves BD. Method validation for the
recovery of the porcine respiratory and reproductive syndrome virus, a potential
SARS-CoV-2 surrogate, from stainless steel. Lett Appl Microbiol. 2023 Feb
16;76(2):ovac068. doi: 10.1093/lambio/ovac068. PMID: 36660929.